Name | Number of supported studies | Average coverage | |
---|---|---|---|
oligodendrocyte | 11 studies | 41% ± 13% | |
astrocyte | 9 studies | 29% ± 9% | |
oligodendrocyte precursor cell | 7 studies | 35% ± 13% | |
endothelial cell | 6 studies | 25% ± 10% | |
glutamatergic neuron | 5 studies | 38% ± 15% | |
retina horizontal cell | 4 studies | 35% ± 9% | |
Mueller cell | 4 studies | 25% ± 5% | |
neuron | 3 studies | 28% ± 13% | |
retinal ganglion cell | 3 studies | 44% ± 22% | |
fibroblast | 3 studies | 23% ± 2% | |
GABAergic neuron | 3 studies | 38% ± 6% | |
interneuron | 3 studies | 35% ± 10% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 7 studies | 35% ± 12% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 18372.29 | 2642 / 2642 | 100% | 111.51 | 705 / 705 |
bladder | 100% | 6366.62 | 21 / 21 | 100% | 45.32 | 503 / 504 |
stomach | 100% | 3939.81 | 358 / 359 | 100% | 31.07 | 285 / 286 |
uterus | 100% | 4454.40 | 170 / 170 | 99% | 34.18 | 456 / 459 |
intestine | 100% | 4464.71 | 965 / 966 | 99% | 33.09 | 523 / 527 |
breast | 100% | 4263.54 | 457 / 459 | 99% | 45.40 | 1111 / 1118 |
thymus | 100% | 6863.30 | 653 / 653 | 99% | 38.72 | 598 / 605 |
esophagus | 100% | 4966.76 | 1444 / 1445 | 99% | 24.45 | 181 / 183 |
skin | 100% | 8047.17 | 1808 / 1809 | 98% | 30.57 | 464 / 472 |
lung | 99% | 4723.72 | 574 / 578 | 99% | 23.33 | 1141 / 1155 |
kidney | 100% | 4993.17 | 89 / 89 | 97% | 33.48 | 878 / 901 |
prostate | 100% | 4241.84 | 244 / 245 | 97% | 21.04 | 486 / 502 |
pancreas | 94% | 2569.75 | 308 / 328 | 98% | 40.31 | 175 / 178 |
ovary | 100% | 4741.63 | 180 / 180 | 91% | 18.59 | 390 / 430 |
adrenal gland | 93% | 2439.22 | 239 / 258 | 90% | 26.59 | 208 / 230 |
liver | 39% | 754.38 | 89 / 226 | 75% | 13.15 | 305 / 406 |
tonsil | 0% | 0 | 0 / 0 | 100% | 30.87 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 32.27 | 1 / 1 |
blood vessel | 100% | 8035.12 | 1331 / 1335 | 0% | 0 | 0 / 0 |
adipose | 100% | 4726.65 | 1200 / 1204 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 98% | 18.99 | 78 / 80 |
spleen | 96% | 2462.10 | 231 / 241 | 0% | 0 | 0 / 0 |
heart | 94% | 2946.23 | 809 / 861 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 83% | 15.02 | 24 / 29 |
peripheral blood | 19% | 1288.57 | 172 / 929 | 0% | 0 | 0 / 0 |
muscle | 8% | 156.20 | 68 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0035542 | Biological process | regulation of SNARE complex assembly |
GO_0008104 | Biological process | protein localization |
GO_0061640 | Biological process | cytoskeleton-dependent cytokinesis |
GO_0030424 | Cellular component | axon |
GO_0030672 | Cellular component | synaptic vesicle membrane |
GO_0098793 | Cellular component | presynapse |
GO_0032153 | Cellular component | cell division site |
GO_0015630 | Cellular component | microtubule cytoskeleton |
GO_0031105 | Cellular component | septin complex |
GO_0005940 | Cellular component | septin ring |
GO_0005525 | Molecular function | GTP binding |
GO_0003924 | Molecular function | GTPase activity |
GO_0005515 | Molecular function | protein binding |
GO_0060090 | Molecular function | molecular adaptor activity |
Gene name | SEPTIN8 |
Protein name | Septin 8 Septin Septin-8 |
Synonyms | KIAA0202 SEPT8 |
Description | FUNCTION: Filament-forming cytoskeletal GTPase (By similarity). May play a role in platelet secretion . Seems to participate in the process of SNARE complex formation in synaptic vesicles (By similarity). .; FUNCTION: [Isoform 4]: Stabilizes BACE1 protein levels and promotes the sorting and accumulation of BACE1 to the recycling or endosomal compartments, modulating the beta-amyloidogenic processing of APP. . FUNCTION: Filament-forming cytoskeletal GTPase. . FUNCTION: Filament-forming cytoskeletal GTPase. . FUNCTION: Filament-forming cytoskeletal GTPase. . FUNCTION: Filament-forming cytoskeletal GTPase. . FUNCTION: Filament-forming cytoskeletal GTPase. . |
Accessions | ENST00000378719.7 [Q92599-1] ENST00000453480.5 ENST00000296873.11 [Q92599-2] ENST00000371493.7 A0A087X142 Q92599 ENST00000378706.5 A6NFQ9 F8W8I8 ENST00000458488.2 [Q92599-4] ENST00000378701.5 ENST00000448933.5 [Q92599-3] ENST00000620483.4 A6NMH6 B7ZVZ1 C9J4G8 ENST00000378721.8 Q3YL86 A0A0A0MRP8 ENST00000414594.5 C9JV02 ENST00000378699.6 [Q92599-3] |