SEPTIN3 report

Query

Invalid input gene. Please select from the suggestions.

I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
glutamatergic neuron	10 studies	31% ± 18%	Explore
neuron	5 studies	24% ± 7%	Explore
GABAergic neuron	5 studies	34% ± 19%	Explore
retinal ganglion cell	3 studies	45% ± 18%	Explore
astrocyte	3 studies	28% ± 13%	Explore
interneuron	3 studies	47% ± 21%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
brain	5 studies	30% ± 14%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
brain	99%	21993.50	2627 / 2642	100%	138.94	702 / 705
eye	0%	0	0 / 0	100%	38.95	80 / 80
skin	0%	1.04	1 / 1809	74%	30.50	348 / 472
adrenal gland	1%	31.33	3 / 258	63%	24.46	145 / 230
breast	0%	0	0 / 459	54%	9.01	607 / 1118
uterus	0%	0	0 / 170	51%	6.08	232 / 459
prostate	0%	0	0 / 245	44%	3.63	223 / 502
tonsil	0%	0	0 / 0	42%	4.78	19 / 45
ovary	0%	0	0 / 180	31%	2.46	135 / 430
esophagus	0%	2.76	2 / 1445	30%	3.19	54 / 183
lung	0%	0	0 / 578	28%	3.05	329 / 1155
bladder	0%	0	0 / 21	23%	3.16	115 / 504
pancreas	0%	0	0 / 328	19%	1.97	33 / 178
thymus	0%	2.29	1 / 653	18%	1.23	110 / 605
stomach	0%	0	0 / 359	12%	1.39	35 / 286
intestine	0%	0	0 / 966	9%	0.67	50 / 527
lymph node	0%	0	0 / 0	7%	0.61	2 / 29
kidney	0%	0	0 / 89	5%	0.88	47 / 901
liver	0%	0	0 / 226	5%	0.56	21 / 406
peripheral blood	1%	15.94	6 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
adipose	0%	0	0 / 1204	0%	0	0 / 0
blood vessel	0%	0	0 / 1335	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
heart	0%	0	0 / 861	0%	0	0 / 0
muscle	0%	0	0 / 803	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
spleen	0%	0	0 / 241	0%	0	0 / 0
ureter	0%	0	0 / 0	0%	0	0 / 1