I. Expression across cell types
Name | Number of supported studies  | Average coverage | |
|---|---|---|---|
| endothelial cell | 4 studies | 20% ± 7% | |
| epithelial cell | 4 studies | 31% ± 11% | |
| glutamatergic neuron | 3 studies | 28% ± 1% | |
| dendritic cell | 3 studies | 21% ± 4% |
Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| endothelial cell | 4 studies | 20% ± 7% | |
| epithelial cell | 4 studies | 31% ± 11% | |
| glutamatergic neuron | 3 studies | 28% ± 1% | |
| dendritic cell | 3 studies | 21% ± 4% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
|---|---|---|---|---|---|---|
| esophagus | 100% | 2430.04 | 1445 / 1445 | 100% | 43.84 | 183 / 183 |
| liver | 100% | 2491.55 | 226 / 226 | 100% | 41.58 | 406 / 406 |
| lung | 100% | 2154.21 | 578 / 578 | 100% | 46.62 | 1155 / 1155 |
| ovary | 100% | 2858.40 | 180 / 180 | 100% | 65.18 | 430 / 430 |
| pancreas | 100% | 1671.34 | 328 / 328 | 100% | 39.85 | 178 / 178 |
| prostate | 100% | 2456.49 | 245 / 245 | 100% | 50.52 | 502 / 502 |
| stomach | 100% | 2072.32 | 359 / 359 | 100% | 48.46 | 286 / 286 |
| thymus | 100% | 3847.94 | 653 / 653 | 100% | 68.76 | 605 / 605 |
| brain | 100% | 2305.16 | 2641 / 2642 | 100% | 69.50 | 705 / 705 |
| breast | 100% | 2887.19 | 459 / 459 | 100% | 72.31 | 1117 / 1118 |
| kidney | 100% | 2991.33 | 89 / 89 | 100% | 46.91 | 900 / 901 |
| uterus | 100% | 2579.87 | 170 / 170 | 100% | 61.07 | 458 / 459 |
| intestine | 100% | 2553.71 | 966 / 966 | 100% | 50.61 | 525 / 527 |
| bladder | 100% | 2412.10 | 21 / 21 | 100% | 55.62 | 502 / 504 |
| skin | 100% | 2436.19 | 1809 / 1809 | 99% | 40.58 | 469 / 472 |
| adrenal gland | 100% | 3098.31 | 258 / 258 | 98% | 44.09 | 226 / 230 |
| adipose | 100% | 2532.25 | 1204 / 1204 | 0% | 0 | 0 / 0 |
| blood vessel | 100% | 2347.73 | 1335 / 1335 | 0% | 0 | 0 / 0 |
| lymph node | 0% | 0 | 0 / 0 | 100% | 49.76 | 29 / 29 |
| muscle | 100% | 2024.10 | 803 / 803 | 0% | 0 | 0 / 0 |
| spleen | 100% | 2299.80 | 241 / 241 | 0% | 0 | 0 / 0 |
| tonsil | 0% | 0 | 0 / 0 | 100% | 48.32 | 45 / 45 |
| ureter | 0% | 0 | 0 / 0 | 100% | 31.04 | 1 / 1 |
| heart | 99% | 1664.10 | 855 / 861 | 0% | 0 | 0 / 0 |
| eye | 0% | 0 | 0 / 0 | 99% | 32.27 | 79 / 80 |
| peripheral blood | 74% | 1215.75 | 689 / 929 | 0% | 0 | 0 / 0 |
| abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| GO_0036211 | Biological process | protein modification process |
| GO_0016260 | Biological process | selenocysteine biosynthetic process |
| GO_0031965 | Cellular component | nuclear membrane |
| GO_0005886 | Cellular component | plasma membrane |
| GO_0005737 | Cellular component | cytoplasm |
| GO_0005525 | Molecular function | GTP binding |
| GO_0004756 | Molecular function | selenide, water dikinase activity |
| GO_0042802 | Molecular function | identical protein binding |
| GO_0005515 | Molecular function | protein binding |
| GO_0046872 | Molecular function | metal ion binding |
| GO_0005524 | Molecular function | ATP binding |
| Gene name | SEPHS1 |
| Protein name | Selenide, water dikinase 1 (EC 2.7.9.3) (Selenium donor protein 1) (Selenophosphate synthase 1) Selenophosphate synthetase 1 |
| Synonyms | SPS1 SELD SPS |
| Description | FUNCTION: Synthesizes selenophosphate from selenide and ATP. . |
| Accessions | Q5T5U7 Q5T5U6 ENST00000545675.5 [P49903-3] ENST00000413411.5 ENST00000378614.8 [P49903-2] ENST00000425947.1 P49903 ENST00000327347.10 [P49903-1] |
