SEC16B | OmnibusX

Name	Number of supported studies	Average coverage
hepatocyte	3 studies	47% ± 11%	Explore

sc-RNAseq data

Insufficient scRNA-seq data for expression of SEC16B at tissue level.

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
liver	100%	6446.24	226 / 226	31%	0.54	126 / 406
stomach	100%	1822.97	358 / 359	1%	0.02	4 / 286
bladder	100%	893.81	21 / 21	1%	0.02	5 / 504
kidney	100%	1783.38	89 / 89	1%	0.02	7 / 901
uterus	100%	1251.95	170 / 170	0%	0.01	2 / 459
adrenal gland	100%	1255.24	258 / 258	0%	0.00	1 / 230
intestine	99%	1402.48	960 / 966	1%	0.02	5 / 527
pancreas	100%	2142.22	328 / 328	0%	0	0 / 178
spleen	100%	2617.83	241 / 241	0%	0	0 / 0
breast	99%	1492.71	455 / 459	0%	0.01	4 / 1118
ovary	99%	1175.67	179 / 180	0%	0	0 / 430
thymus	99%	1476.50	649 / 653	0%	0	0 / 605
adipose	99%	1254.95	1192 / 1204	0%	0	0 / 0
esophagus	95%	735.88	1374 / 1445	2%	0.03	4 / 183
heart	97%	953.25	831 / 861	0%	0	0 / 0
skin	96%	659.79	1740 / 1809	0%	0	0 / 472
prostate	96%	849.97	234 / 245	0%	0	0 / 502
blood vessel	95%	855.50	1274 / 1335	0%	0	0 / 0
lung	93%	705.58	540 / 578	0%	0.00	3 / 1155
muscle	91%	801.44	727 / 803	0%	0	0 / 0
brain	65%	404.01	1726 / 2642	0%	0.00	1 / 705
peripheral blood	0%	0.55	1 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
eye	0%	0	0 / 0	0%	0	0 / 80
gingiva	0%	0	0 / 0	0%	0	0 / 0
lymph node	0%	0	0 / 0	0%	0	0 / 29
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
tonsil	0%	0	0 / 0	0%	0	0 / 45
ureter	0%	0	0 / 0	0%	0	0 / 1

GO_0007029	Biological process	endoplasmic reticulum organization
GO_0010628	Biological process	positive regulation of gene expression
GO_0015031	Biological process	protein transport
GO_0006914	Biological process	autophagy
GO_0007030	Biological process	Golgi organization
GO_0070973	Biological process	protein localization to endoplasmic reticulum exit site
GO_0006888	Biological process	endoplasmic reticulum to Golgi vesicle-mediated transport
GO_0070863	Biological process	positive regulation of protein exit from endoplasmic reticulum
GO_0007031	Biological process	peroxisome organization
GO_0016559	Biological process	peroxisome fission
GO_0048208	Biological process	COPII vesicle coating
GO_0043231	Cellular component	intracellular membrane-bounded organelle
GO_0012507	Cellular component	ER to Golgi transport vesicle membrane
GO_0000139	Cellular component	Golgi membrane
GO_0005829	Cellular component	cytosol
GO_0070971	Cellular component	endoplasmic reticulum exit site
GO_0005789	Cellular component	endoplasmic reticulum membrane
GO_0005515	Molecular function	protein binding

Gene name	SEC16B
Protein name	SEC16 homolog B, endoplasmic reticulum export factor Protein transport protein sec16 Protein transport protein Sec16B (Leucine zipper transcription regulator 2) (Regucalcin gene promoter region-related protein p117) (RGPR-p117) (SEC16 homolog B)
Synonyms	SEC16S KIAA1928 RGPR LZTR2
Description	FUNCTION: Plays a role in the organization of the endoplasmic reticulum exit sites (ERES), also known as transitional endoplasmic reticulum (tER). Required for secretory cargo traffic from the endoplasmic reticulum to the Golgi apparatus . Involved in peroxisome biogenesis. Regulates the transport of peroxisomal biogenesis factors PEX3 and PEX16 from the ER to peroxisomes . . FUNCTION: Plays a role in the organization of the endoplasmic reticulum exit sites (ERES), also known as transitional endoplasmic reticulum (tER). Required for secretory cargo traffic from the endoplasmic reticulum to the Golgi apparatus. .
Accessions	U3KQ39 Q96JE7 ENST00000527976.1 ENST00000528461.5 H0YE70 ENST00000464631.6 ENST00000308284.11 [Q96JE7-1] E9PK14

SEC16B report