Name | Number of supported studies | Average coverage | |
---|---|---|---|
Mueller cell | 5 studies | 30% ± 8% | |
astrocyte | 5 studies | 31% ± 10% | |
oligodendrocyte precursor cell | 4 studies | 21% ± 6% | |
retinal pigment epithelial cell | 3 studies | 32% ± 12% | |
retinal rod cell | 3 studies | 20% ± 4% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
eye | 3 studies | 19% ± 3% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 3479.54 | 2641 / 2642 | 100% | 49.65 | 702 / 705 |
prostate | 100% | 3573.30 | 244 / 245 | 99% | 50.67 | 498 / 502 |
liver | 100% | 12559.44 | 226 / 226 | 91% | 56.21 | 369 / 406 |
thymus | 100% | 1207.55 | 651 / 653 | 81% | 12.36 | 488 / 605 |
breast | 68% | 4579.10 | 313 / 459 | 82% | 38.55 | 918 / 1118 |
esophagus | 92% | 1451.76 | 1332 / 1445 | 56% | 6.83 | 102 / 183 |
kidney | 90% | 709.84 | 80 / 89 | 51% | 4.76 | 456 / 901 |
skin | 95% | 1217.00 | 1723 / 1809 | 45% | 5.69 | 212 / 472 |
uterus | 56% | 285.25 | 95 / 170 | 59% | 8.30 | 273 / 459 |
stomach | 86% | 590.10 | 309 / 359 | 29% | 2.24 | 82 / 286 |
bladder | 67% | 394.43 | 14 / 21 | 43% | 5.56 | 217 / 504 |
pancreas | 11% | 56.85 | 35 / 328 | 88% | 14.94 | 157 / 178 |
lung | 52% | 304.10 | 303 / 578 | 41% | 4.78 | 469 / 1155 |
intestine | 60% | 431.28 | 580 / 966 | 29% | 2.59 | 152 / 527 |
ovary | 63% | 328.59 | 114 / 180 | 25% | 2.15 | 106 / 430 |
blood vessel | 73% | 585.57 | 979 / 1335 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 53% | 7.45 | 24 / 45 |
adipose | 41% | 242.18 | 494 / 1204 | 0% | 0 | 0 / 0 |
adrenal gland | 14% | 70.42 | 37 / 258 | 6% | 0.55 | 13 / 230 |
eye | 0% | 0 | 0 / 0 | 19% | 1.69 | 15 / 80 |
heart | 14% | 96.55 | 123 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 12% | 66.49 | 112 / 929 | 0% | 0 | 0 / 0 |
spleen | 6% | 30.78 | 15 / 241 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 3% | 0.18 | 1 / 29 |
muscle | 3% | 19.65 | 25 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0045893 | Biological process | positive regulation of DNA-templated transcription |
GO_0045540 | Biological process | regulation of cholesterol biosynthetic process |
GO_0070062 | Cellular component | extracellular exosome |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005829 | Cellular component | cytosol |
GO_0005737 | Cellular component | cytoplasm |
GO_0005634 | Cellular component | nucleus |
GO_0008431 | Molecular function | vitamin E binding |
GO_0005543 | Molecular function | phospholipid binding |
Gene name | SEC14L2 |
Protein name | SEC14 like lipid binding 2 SEC14-like protein 2 (Alpha-tocopherol-associated protein) (TAP) (hTAP) (Squalene transfer protein) (Supernatant protein factor) (SPF) SEC14 like lipid binding 2 (SEC14-like 2 (S. cerevisiae), isoform CRA_c) (cDNA FLJ34083 fis, clone FCBBF3004409, highly similar to SEC14-like protein 2) |
Synonyms | C22orf6 KIAA1186 hCG_41297 KIAA1658 |
Description | FUNCTION: Carrier protein. Binds to some hydrophobic molecules and promotes their transfer between the different cellular sites. Binds with high affinity to alpha-tocopherol. Also binds with a weaker affinity to other tocopherols and to tocotrienols. May have a transcriptional activatory activity via its association with alpha-tocopherol. Probably recognizes and binds some squalene structure, suggesting that it may regulate cholesterol biosynthesis by increasing the transfer of squalene to a metabolic active pool in the cell. |
Accessions | ENST00000402592.7 [O76054-5] ENST00000437022.5 ENST00000415072.1 ENST00000452649.1 C9JZI9 F8WED8 ENST00000617837.4 C9JYY7 ENST00000429917.5 ENST00000428195.5 F8WEE7 B3KRD8 ENST00000405717.7 [O76054-4] C9JTM4 ENST00000615189.5 [O76054-1] O76054 |