Name | Number of supported studies | Average coverage | |
---|---|---|---|
plasmacytoid dendritic cell | 7 studies | 24% ± 7% | |
epithelial cell | 5 studies | 37% ± 18% | |
ciliated cell | 3 studies | 26% ± 4% | |
GABAergic neuron | 3 studies | 21% ± 1% | |
glutamatergic neuron | 3 studies | 28% ± 5% | |
dendritic cell | 3 studies | 23% ± 4% | |
intestinal crypt stem cell | 3 studies | 23% ± 1% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 3 studies | 22% ± 5% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
ovary | 100% | 319.88 | 180 / 180 | 100% | 60.12 | 430 / 430 |
prostate | 100% | 443.32 | 244 / 245 | 99% | 57.23 | 499 / 502 |
intestine | 100% | 453.94 | 966 / 966 | 98% | 47.12 | 519 / 527 |
lung | 99% | 336.02 | 572 / 578 | 99% | 50.73 | 1149 / 1155 |
pancreas | 99% | 330.09 | 326 / 328 | 99% | 28.70 | 176 / 178 |
thymus | 100% | 443.44 | 653 / 653 | 98% | 33.33 | 594 / 605 |
bladder | 100% | 383.29 | 21 / 21 | 98% | 44.10 | 493 / 504 |
esophagus | 100% | 384.54 | 1445 / 1445 | 98% | 43.96 | 179 / 183 |
skin | 100% | 434.53 | 1803 / 1809 | 98% | 57.58 | 463 / 472 |
uterus | 99% | 353.79 | 169 / 170 | 98% | 45.78 | 450 / 459 |
stomach | 100% | 353.08 | 359 / 359 | 96% | 42.90 | 274 / 286 |
kidney | 100% | 689.79 | 89 / 89 | 95% | 30.63 | 858 / 901 |
brain | 99% | 399.18 | 2627 / 2642 | 95% | 41.91 | 671 / 705 |
adrenal gland | 100% | 673.40 | 258 / 258 | 94% | 29.35 | 217 / 230 |
liver | 100% | 475.02 | 226 / 226 | 92% | 25.69 | 373 / 406 |
breast | 100% | 436.33 | 459 / 459 | 83% | 24.32 | 932 / 1118 |
adipose | 100% | 402.86 | 1204 / 1204 | 0% | 0 | 0 / 0 |
spleen | 100% | 416.23 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 35.16 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 19.49 | 1 / 1 |
muscle | 100% | 418.20 | 802 / 803 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 330.62 | 1332 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 97% | 44.20 | 28 / 29 |
heart | 97% | 498.34 | 831 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 96% | 621.22 | 894 / 929 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 94% | 26.72 | 75 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0034553 | Biological process | mitochondrial respiratory chain complex II assembly |
GO_0006105 | Biological process | succinate metabolic process |
GO_0006111 | Biological process | regulation of gluconeogenesis |
GO_0005758 | Cellular component | mitochondrial intermembrane space |
GO_0005759 | Cellular component | mitochondrial matrix |
Gene name | SDHAF3 |
Protein name | Succinate dehydrogenase assembly factor 3 (SDH assembly factor 3) (SDHAF3) Succinate dehydrogenase assembly factor 3, mitochondrial (SDH assembly factor 3) (SDHAF3) |
Synonyms | ACN9 DC11 |
Description | FUNCTION: Plays an essential role in the assembly of succinate dehydrogenase (SDH), an enzyme complex (also referred to as respiratory complex II) that is a component of both the tricarboxylic acid (TCA) cycle and the mitochondrial electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Promotes maturation of the iron-sulfur protein subunit of the SDH catalytic dimer, protecting it from the deleterious effects of oxidants. May act together with SDHAF1. . FUNCTION: Plays an essential role in the assembly of succinate dehydrogenase (SDH), an enzyme complex (also referred to as respiratory complex II) that is a component of both the tricarboxylic acid (TCA) cycle and the mitochondrial electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Promotes maturation of the iron-sulfur protein subunit SDHB of the SDH catalytic dimer, protecting it from the deleterious effects of oxidants. May act together with SDHAF1. . |
Accessions | ENST00000360382.4 Q9NRP4 ENST00000432641.3 F8W9V1 |