Name | Number of supported studies | Average coverage | |
---|---|---|---|
epithelial cell | 3 studies | 26% ± 11% | |
dendritic cell | 3 studies | 20% ± 2% |
Insufficient scRNA-seq data for expression of SDHAF1 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 811.37 | 1445 / 1445 | 100% | 26.22 | 183 / 183 |
liver | 100% | 779.05 | 226 / 226 | 100% | 37.56 | 406 / 406 |
ovary | 100% | 666.10 | 180 / 180 | 100% | 50.00 | 430 / 430 |
pancreas | 100% | 620.12 | 328 / 328 | 100% | 38.79 | 178 / 178 |
thymus | 100% | 828.02 | 653 / 653 | 100% | 46.18 | 604 / 605 |
brain | 100% | 843.06 | 2637 / 2642 | 100% | 39.99 | 705 / 705 |
uterus | 100% | 813.91 | 170 / 170 | 100% | 48.30 | 458 / 459 |
kidney | 100% | 753.12 | 89 / 89 | 100% | 29.78 | 899 / 901 |
skin | 100% | 713.98 | 1807 / 1809 | 100% | 34.54 | 471 / 472 |
adrenal gland | 100% | 705.40 | 258 / 258 | 100% | 42.11 | 229 / 230 |
intestine | 100% | 920.18 | 966 / 966 | 99% | 43.24 | 524 / 527 |
prostate | 100% | 807.62 | 245 / 245 | 99% | 46.70 | 499 / 502 |
breast | 100% | 788.09 | 459 / 459 | 99% | 36.72 | 1111 / 1118 |
stomach | 100% | 694.11 | 358 / 359 | 100% | 39.23 | 285 / 286 |
lung | 99% | 619.57 | 575 / 578 | 100% | 35.41 | 1153 / 1155 |
bladder | 100% | 882.05 | 21 / 21 | 99% | 45.65 | 500 / 504 |
eye | 0% | 0 | 0 / 0 | 100% | 36.50 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 66.15 | 29 / 29 |
spleen | 100% | 874.64 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 39.00 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 23.87 | 1 / 1 |
blood vessel | 100% | 694.11 | 1334 / 1335 | 0% | 0 | 0 / 0 |
adipose | 100% | 666.63 | 1203 / 1204 | 0% | 0 | 0 / 0 |
muscle | 100% | 509.89 | 799 / 803 | 0% | 0 | 0 / 0 |
heart | 98% | 428.41 | 848 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 94% | 472.84 | 870 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0034553 | Biological process | mitochondrial respiratory chain complex II assembly |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005759 | Cellular component | mitochondrial matrix |
GO_0005739 | Cellular component | mitochondrion |
GO_0005515 | Molecular function | protein binding |
Gene name | SDHAF1 |
Protein name | Succinate dehydrogenase assembly factor 1, mitochondrial (SDH assembly factor 1) (SDHAF1) (LYR motif-containing protein 8) |
Synonyms | LYRM8 |
Description | FUNCTION: Plays an essential role in the assembly of succinate dehydrogenase (SDH), an enzyme complex (also referred to as respiratory complex II) that is a component of both the tricarboxylic acid (TCA) cycle and the mitochondrial electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol . Promotes maturation of the iron-sulfur protein subunit SDHB of the SDH catalytic dimer, protecting it from the deleterious effects of oxidants . May act together with SDHAF3 . Contributes to iron-sulfur cluster incorporation into SDHB by binding to SDHB and recruiting the iron-sulfur transfer complex formed by HSC20, HSPA9 and ISCU through direct binding to HSC20 . . |
Accessions | A6NFY7 ENST00000378887.4 |