SDCBP2 report

Query

Invalid input gene. Please select from the suggestions.

I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
epithelial cell	10 studies	42% ± 17%	Explore
secretory cell	7 studies	36% ± 20%	Explore
enterocyte	7 studies	41% ± 16%	Explore
squamous epithelial cell	4 studies	56% ± 16%	Explore
basal cell	4 studies	20% ± 1%	Explore
ciliated cell	3 studies	21% ± 5%	Explore
goblet cell	3 studies	25% ± 7%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
intestine	4 studies	23% ± 5%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
thymus	97%	1145.41	632 / 653	82%	18.09	494 / 605
brain	90%	940.26	2383 / 2642	84%	13.67	591 / 705
stomach	74%	2409.91	267 / 359	96%	52.57	274 / 286
lung	95%	1427.39	550 / 578	73%	29.42	840 / 1155
pancreas	63%	546.87	206 / 328	94%	96.58	168 / 178
intestine	56%	3321.80	541 / 966	96%	57.46	504 / 527
bladder	62%	749.48	13 / 21	83%	40.32	416 / 504
esophagus	48%	3203.71	687 / 1445	88%	59.83	161 / 183
uterus	34%	245.53	58 / 170	75%	42.79	346 / 459
liver	55%	610.30	124 / 226	44%	16.44	180 / 406
tonsil	0%	0	0 / 0	96%	54.11	43 / 45
kidney	74%	915.76	66 / 89	16%	8.90	144 / 901
skin	77%	3026.19	1388 / 1809	13%	2.11	59 / 472
breast	61%	413.83	278 / 459	22%	3.37	245 / 1118
adipose	62%	420.44	751 / 1204	0%	0	0 / 0
prostate	47%	371.30	114 / 245	16%	2.89	78 / 502
ovary	16%	88.79	28 / 180	23%	2.89	97 / 430
adrenal gland	11%	96.16	28 / 258	21%	2.17	48 / 230
spleen	13%	58.76	31 / 241	0%	0	0 / 0
heart	8%	46.15	66 / 861	0%	0	0 / 0
blood vessel	8%	40.77	102 / 1335	0%	0	0 / 0
muscle	4%	19.18	30 / 803	0%	0	0 / 0
peripheral blood	3%	13.24	25 / 929	0%	0	0 / 0
eye	0%	0	0 / 0	3%	0.22	2 / 80
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
lymph node	0%	0	0 / 0	0%	0	0 / 29
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
ureter	0%	0	0 / 0	0%	0	0 / 1