Name | Number of supported studies | Average coverage | |
---|---|---|---|
astrocyte | 10 studies | 30% ± 13% | |
glutamatergic neuron | 9 studies | 39% ± 24% | |
endothelial cell | 6 studies | 27% ± 8% | |
retinal ganglion cell | 5 studies | 51% ± 23% | |
GABAergic neuron | 5 studies | 46% ± 19% | |
oligodendrocyte precursor cell | 5 studies | 29% ± 11% | |
plasmacytoid dendritic cell | 5 studies | 22% ± 8% | |
neuron | 4 studies | 30% ± 10% | |
retinal cone cell | 4 studies | 29% ± 7% | |
interneuron | 4 studies | 42% ± 20% | |
oligodendrocyte | 4 studies | 26% ± 7% | |
retinal bipolar neuron | 3 studies | 20% ± 5% | |
microglial cell | 3 studies | 24% ± 3% | |
retina horizontal cell | 3 studies | 29% ± 4% | |
OFF-bipolar cell | 3 studies | 23% ± 5% | |
dendritic cell | 3 studies | 28% ± 6% | |
macrophage | 3 studies | 18% ± 2% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 23684.28 | 2642 / 2642 | 100% | 219.76 | 703 / 705 |
ovary | 99% | 5594.59 | 179 / 180 | 93% | 51.16 | 401 / 430 |
uterus | 100% | 6304.40 | 170 / 170 | 89% | 47.87 | 408 / 459 |
prostate | 99% | 5355.83 | 242 / 245 | 83% | 33.51 | 417 / 502 |
esophagus | 87% | 6191.10 | 1257 / 1445 | 94% | 65.11 | 172 / 183 |
pancreas | 85% | 3044.34 | 279 / 328 | 96% | 53.57 | 170 / 178 |
breast | 92% | 3456.26 | 421 / 459 | 89% | 58.20 | 993 / 1118 |
adrenal gland | 92% | 4372.28 | 237 / 258 | 87% | 108.26 | 199 / 230 |
kidney | 89% | 3694.96 | 79 / 89 | 89% | 67.21 | 798 / 901 |
lung | 84% | 2878.29 | 485 / 578 | 93% | 59.08 | 1070 / 1155 |
bladder | 100% | 5679.52 | 21 / 21 | 74% | 34.69 | 374 / 504 |
thymus | 78% | 2339.41 | 511 / 653 | 91% | 40.33 | 550 / 605 |
intestine | 82% | 5244.04 | 788 / 966 | 73% | 33.61 | 383 / 527 |
stomach | 74% | 3835.87 | 266 / 359 | 71% | 36.83 | 204 / 286 |
skin | 54% | 4226.92 | 969 / 1809 | 66% | 65.73 | 311 / 472 |
ureter | 0% | 0 | 0 / 0 | 100% | 16.54 | 1 / 1 |
blood vessel | 99% | 7734.54 | 1324 / 1335 | 0% | 0 | 0 / 0 |
adipose | 88% | 3322.44 | 1055 / 1204 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 87% | 40.70 | 39 / 45 |
lymph node | 0% | 0 | 0 / 0 | 62% | 31.86 | 18 / 29 |
heart | 49% | 1595.97 | 422 / 861 | 0% | 0 | 0 / 0 |
spleen | 35% | 954.54 | 84 / 241 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 20% | 9.53 | 16 / 80 |
peripheral blood | 19% | 2104.79 | 174 / 929 | 0% | 0 | 0 / 0 |
liver | 0% | 10.57 | 1 / 226 | 16% | 9.00 | 66 / 406 |
muscle | 0% | 6.14 | 2 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0006887 | Biological process | exocytosis |
GO_0006508 | Biological process | proteolysis |
GO_0098693 | Biological process | regulation of synaptic vesicle cycle |
GO_0098793 | Cellular component | presynapse |
GO_0031965 | Cellular component | nuclear membrane |
GO_0005737 | Cellular component | cytoplasm |
GO_0005634 | Cellular component | nucleus |
GO_0005515 | Molecular function | protein binding |
GO_0070004 | Molecular function | cysteine-type exopeptidase activity |
GO_0016805 | Molecular function | dipeptidase activity |
GO_0003674 | Molecular function | molecular_function |
Gene name | SCRN1 |
Protein name | Secernin 1 Secernin-1 |
Synonyms | tcag7.1066 KIAA0193 |
Description | FUNCTION: Regulates exocytosis in mast cells. Increases both the extent of secretion and the sensitivity of mast cells to stimulation with calcium (By similarity). . |
Accessions | C9K052 ENST00000631335.1 C9J7U9 A0A090N7T9 ENST00000409497.5 [Q12765-1] Q12765 ENST00000438497.5 ENST00000425819.6 [Q12765-3] ENST00000426154.5 [Q12765-1] ENST00000242059.10 [Q12765-1] ENST00000434476.6 [Q12765-2] ENST00000409570.3 ENST00000421434.5 B8ZZP4 |