SCLY | OmnibusX

sc-RNAseq data

Insufficient scRNA-seq data for expression of SCLY at tissue level.

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
esophagus	100%	686.23	1444 / 1445	48%	0.87	87 / 183
stomach	100%	527.58	359 / 359	35%	0.54	101 / 286
intestine	100%	856.46	966 / 966	34%	0.50	178 / 527
liver	100%	2203.41	226 / 226	19%	0.28	77 / 406
brain	100%	807.40	2637 / 2642	17%	0.22	119 / 705
ovary	100%	699.55	180 / 180	16%	0.23	67 / 430
lung	99%	569.29	575 / 578	12%	0.18	139 / 1155
kidney	100%	1256.02	89 / 89	11%	0.16	101 / 901
bladder	100%	878.67	21 / 21	11%	0.19	55 / 504
skin	100%	571.78	1802 / 1809	11%	0.16	53 / 472
uterus	100%	1004.58	170 / 170	9%	0.14	43 / 459
pancreas	100%	1465.97	328 / 328	3%	0.04	5 / 178
breast	100%	585.29	459 / 459	3%	0.04	28 / 1118
adrenal gland	100%	449.03	258 / 258	2%	0.03	5 / 230
prostate	100%	740.55	245 / 245	2%	0.03	10 / 502
thymus	100%	972.14	653 / 653	1%	0.01	4 / 605
adipose	100%	568.28	1204 / 1204	0%	0	0 / 0
spleen	100%	798.11	241 / 241	0%	0	0 / 0
blood vessel	100%	677.47	1333 / 1335	0%	0	0 / 0
muscle	99%	415.55	797 / 803	0%	0	0 / 0
heart	97%	502.50	837 / 861	0%	0	0 / 0
peripheral blood	91%	663.28	850 / 929	0%	0	0 / 0
lymph node	0%	0	0 / 0	14%	0.16	4 / 29
tonsil	0%	0	0 / 0	4%	0.05	2 / 45
eye	0%	0	0 / 0	1%	0.01	1 / 80
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
ureter	0%	0	0 / 0	0%	0	0 / 1

GO_0006520	Biological process	amino acid metabolic process
GO_0016261	Biological process	selenocysteine catabolic process
GO_1902494	Cellular component	catalytic complex
GO_0005829	Cellular component	cytosol
GO_0005794	Cellular component	Golgi apparatus
GO_0016597	Molecular function	amino acid binding
GO_0016740	Molecular function	transferase activity
GO_0070279	Molecular function	vitamin B6 binding
GO_0042803	Molecular function	protein homodimerization activity
GO_0005515	Molecular function	protein binding
GO_0009000	Molecular function	selenocysteine lyase activity

Gene name	SCLY
Protein name	Selenocysteine lyase Alternative protein SCLY Selenocysteine lyase (hSCL) (EC 4.4.1.16) Selenocysteine lyase (EC 4.4.1.16)
Synonyms	hCG_2039445 SCL
Description	FUNCTION: Catalyzes the decomposition of L-selenocysteine to L-alanine and elemental selenium. . FUNCTION: Catalyzes the decomposition of L-selenocysteine to L-alanine and elemental selenium. . FUNCTION: Catalyzes the decomposition of L-selenocysteine to L-alanine and elemental selenium. . FUNCTION: Catalyzes the decomposition of L-selenocysteine to L-alanine and elemental selenium. . FUNCTION: Catalyzes the decomposition of L-selenocysteine to L-alanine and elemental selenium. . FUNCTION: Catalyzes the decomposition of L-selenocysteine to L-alanine and elemental selenium. . FUNCTION: Catalyzes the decomposition of L-selenocysteine to L-alanine and elemental selenium. . FUNCTION: Catalyzes the decomposition of L-selenocysteine to L-alanine and elemental selenium. . FUNCTION: Catalyzes the decomposition of L-selenocysteine to L-alanine and elemental selenium. .
Accessions	ENST00000433750.1 C9JNL5 ENST00000443532.5 ENST00000423324.5 ENST00000651534.1 ENST00000413463.6 ENST00000440143.1 ENST00000409736.6 [Q96I15-2] H7C1N7 H7C277 F8WBU3 L8E8S1 A0A0A0MQU4 Q96I15 H7C4A1 ENST00000437134.5 ENST00000416757.1 H7C2M1 H7C3V9 B4DDP9 ENST00000450965.5 ENST00000412508.6 F8WCL3 ENST00000254663.12 [Q96I15-1] H7C280 ENST00000446202.5 H7C2H3

SCLY report