Name | Number of supported studies | Average coverage | |
---|---|---|---|
oligodendrocyte | 9 studies | 25% ± 6% | |
astrocyte | 8 studies | 33% ± 13% | |
adipocyte | 6 studies | 22% ± 4% | |
GABAergic neuron | 5 studies | 34% ± 16% | |
glutamatergic neuron | 5 studies | 39% ± 16% | |
oligodendrocyte precursor cell | 4 studies | 25% ± 4% | |
interneuron | 3 studies | 38% ± 22% | |
cardiac muscle cell | 3 studies | 16% ± 0% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 7 studies | 31% ± 12% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 99% | 54.08 | 2625 / 2642 | 56% | 0.85 | 398 / 705 |
thymus | 100% | 92.34 | 653 / 653 | 40% | 0.59 | 240 / 605 |
breast | 98% | 50.72 | 451 / 459 | 33% | 0.67 | 369 / 1118 |
ovary | 94% | 25.39 | 169 / 180 | 27% | 0.62 | 115 / 430 |
esophagus | 93% | 25.19 | 1348 / 1445 | 23% | 0.41 | 43 / 183 |
prostate | 99% | 42.97 | 243 / 245 | 17% | 0.27 | 86 / 502 |
lung | 95% | 40.72 | 551 / 578 | 16% | 0.30 | 181 / 1155 |
adrenal gland | 99% | 59.98 | 256 / 258 | 11% | 0.16 | 26 / 230 |
kidney | 100% | 32.94 | 89 / 89 | 7% | 0.11 | 61 / 901 |
pancreas | 99% | 51.27 | 326 / 328 | 6% | 0.13 | 10 / 178 |
uterus | 95% | 29.59 | 162 / 170 | 8% | 0.15 | 35 / 459 |
stomach | 96% | 29.87 | 346 / 359 | 6% | 0.11 | 18 / 286 |
intestine | 97% | 29.73 | 938 / 966 | 3% | 0.04 | 15 / 527 |
skin | 95% | 56.67 | 1726 / 1809 | 4% | 0.06 | 18 / 472 |
liver | 96% | 35.17 | 217 / 226 | 3% | 0.04 | 12 / 406 |
spleen | 98% | 37.74 | 237 / 241 | 0% | 0 | 0 / 0 |
bladder | 90% | 32.43 | 19 / 21 | 7% | 0.12 | 36 / 504 |
muscle | 98% | 33.93 | 783 / 803 | 0% | 0 | 0 / 0 |
adipose | 97% | 33.95 | 1169 / 1204 | 0% | 0 | 0 / 0 |
heart | 90% | 27.10 | 778 / 861 | 0% | 0 | 0 / 0 |
blood vessel | 82% | 16.81 | 1097 / 1335 | 0% | 0 | 0 / 0 |
peripheral blood | 22% | 5.16 | 206 / 929 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 7% | 0.08 | 2 / 29 |
eye | 0% | 0 | 0 / 0 | 4% | 0.06 | 3 / 80 |
tonsil | 0% | 0 | 0 / 0 | 2% | 0.03 | 1 / 45 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0005576 | Cellular component | extracellular region |
GO_0005515 | Molecular function | protein binding |
Gene name | SCGB2B2 |
Protein name | Secretoglobin family 2B member 2 (Secretoglobin-like protein) |
Synonyms | SCGBL SCGB4A2 |
Description | |
Accessions | Q4G0G5 ENST00000379204.2 ENST00000601241.6 |