Name | Number of supported studies | Average coverage | |
---|---|---|---|
neuron | 9 studies | 46% ± 21% | |
glutamatergic neuron | 7 studies | 45% ± 17% | |
retinal ganglion cell | 6 studies | 68% ± 31% | |
amacrine cell | 6 studies | 38% ± 8% | |
GABAergic neuron | 6 studies | 43% ± 16% | |
interneuron | 5 studies | 48% ± 19% | |
mesothelial cell | 5 studies | 32% ± 12% | |
oligodendrocyte precursor cell | 5 studies | 33% ± 15% | |
enteroendocrine cell | 5 studies | 57% ± 23% | |
oligodendrocyte | 5 studies | 31% ± 10% | |
pancreatic A cell | 4 studies | 99% ± 2% | |
type B pancreatic cell | 4 studies | 93% ± 5% | |
GABAergic amacrine cell | 4 studies | 37% ± 11% | |
neuroendocrine cell | 4 studies | 81% ± 6% | |
retina horizontal cell | 4 studies | 29% ± 7% | |
pancreatic D cell | 3 studies | 98% ± 1% | |
granule cell | 3 studies | 28% ± 12% | |
glycinergic amacrine cell | 3 studies | 27% ± 9% | |
retinal pigment epithelial cell | 3 studies | 24% ± 8% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 99% | 8318.49 | 2604 / 2642 | 98% | 134.20 | 688 / 705 |
pancreas | 95% | 2770.79 | 310 / 328 | 90% | 245.61 | 160 / 178 |
adrenal gland | 20% | 623.54 | 51 / 258 | 78% | 783.68 | 179 / 230 |
thymus | 12% | 141.44 | 78 / 653 | 78% | 68.10 | 469 / 605 |
ovary | 5% | 43.37 | 9 / 180 | 60% | 23.69 | 258 / 430 |
liver | 17% | 161.53 | 39 / 226 | 24% | 4.53 | 98 / 406 |
intestine | 2% | 20.34 | 21 / 966 | 30% | 14.65 | 160 / 527 |
breast | 3% | 35.96 | 16 / 459 | 28% | 5.91 | 308 / 1118 |
lung | 0% | 1.56 | 1 / 578 | 31% | 9.75 | 353 / 1155 |
skin | 24% | 404.48 | 426 / 1809 | 2% | 1.02 | 9 / 472 |
stomach | 6% | 68.52 | 20 / 359 | 19% | 10.14 | 54 / 286 |
kidney | 0% | 0 | 0 / 89 | 24% | 8.33 | 216 / 901 |
bladder | 0% | 0 | 0 / 21 | 24% | 8.98 | 119 / 504 |
uterus | 2% | 16.57 | 3 / 170 | 16% | 6.52 | 74 / 459 |
eye | 0% | 0 | 0 / 0 | 15% | 2.96 | 12 / 80 |
esophagus | 2% | 26.13 | 26 / 1445 | 12% | 1.94 | 22 / 183 |
prostate | 2% | 17.66 | 5 / 245 | 11% | 2.16 | 57 / 502 |
tonsil | 0% | 0 | 0 / 0 | 7% | 1.25 | 3 / 45 |
blood vessel | 1% | 8.96 | 13 / 1335 | 0% | 0 | 0 / 0 |
adipose | 1% | 7.60 | 7 / 1204 | 0% | 0 | 0 / 0 |
muscle | 0% | 1.21 | 1 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
heart | 0% | 0 | 0 / 861 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
peripheral blood | 0% | 0 | 0 / 929 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spleen | 0% | 0 | 0 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0016486 | Biological process | peptide hormone processing |
GO_0046883 | Biological process | regulation of hormone secretion |
GO_0007218 | Biological process | neuropeptide signaling pathway |
GO_0006886 | Biological process | intracellular protein transport |
GO_0030141 | Cellular component | secretory granule |
GO_0005576 | Cellular component | extracellular region |
GO_0005634 | Cellular component | nucleus |
GO_0005525 | Molecular function | GTP binding |
GO_0004857 | Molecular function | enzyme inhibitor activity |
GO_0030234 | Molecular function | enzyme regulator activity |
GO_0005515 | Molecular function | protein binding |
GO_0051082 | Molecular function | unfolded protein binding |
Gene name | SCG5 |
Protein name | Neuroendocrine protein 7B2 (Secretogranin-5) Neuroendocrine protein 7B2 (Pituitary polypeptide) (Secretogranin V) (Secretogranin-5) (Secretory granule endocrine protein I) [Cleaved into: N-terminal peptide; C-terminal peptide] |
Synonyms | SGNE1 |
Description | FUNCTION: Acts as a molecular chaperone for PCSK2/PC2, preventing its premature activation in the regulated secretory pathway. Binds to inactive PCSK2 in the endoplasmic reticulum and facilitates its transport from there to later compartments of the secretory pathway where it is proteolytically matured and activated. Also required for cleavage of PCSK2 but does not appear to be involved in its folding. Plays a role in regulating pituitary hormone secretion. The C-terminal peptide inhibits PCSK2 in vitro. . FUNCTION: Acts as a molecular chaperone for PCSK2/PC2, preventing its premature activation in the regulated secretory pathway. Binds to inactive PCSK2 in the endoplasmic reticulum and facilitates its transport from there to later compartments of the secretory pathway where it is proteolytically matured and activated. Also required for cleavage of PCSK2 but does not appear to be involved in its folding. Plays a role in regulating pituitary hormone secretion. The C-terminal peptide inhibits PCSK2 in vitro. . FUNCTION: Acts as a molecular chaperone for PCSK2/PC2, preventing its premature activation in the regulated secretory pathway. Binds to inactive PCSK2 in the endoplasmic reticulum and facilitates its transport from there to later compartments of the secretory pathway where it is proteolytically matured and activated. Also required for cleavage of PCSK2 but does not appear to be involved in its folding. Plays a role in regulating pituitary hormone secretion. The C-terminal peptide inhibits PCSK2 in vitro. . FUNCTION: Acts as a molecular chaperone for PCSK2/PC2, preventing its premature activation in the regulated secretory pathway. Binds to inactive PCSK2 in the endoplasmic reticulum and facilitates its transport from there to later compartments of the secretory pathway where it is proteolytically matured and activated. Also required for cleavage of PCSK2 but does not appear to be involved in its folding. Plays a role in regulating pituitary hormone secretion. The C-terminal peptide inhibits PCSK2 in vitro. . |
Accessions | H7C4X7 ENST00000471027.1 ENST00000633221.1 ENST00000632674.1 [P05408-2] ENST00000494364.5 C9JNY7 ENST00000413748.6 [P05408-2] C9J650 ENST00000633420.1 ENST00000300175.9 [P05408-1] ENST00000497208.5 ENST00000632955.1 ENST00000632219.1 [P05408-1] P05408 ENST00000614359.1 [P05408-1] |