SAXO4 report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
ciliated cell	8 studies	36% ± 18%	Explore

II. Expression across tissues

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
brain	99%	494.66	2628 / 2642	100%	6.83	705 / 705
thymus	100%	307.30	653 / 653	96%	3.15	578 / 605
prostate	100%	401.03	245 / 245	95%	2.67	475 / 502
adrenal gland	98%	191.48	254 / 258	94%	4.18	216 / 230
breast	100%	385.76	459 / 459	91%	2.96	1016 / 1118
ovary	100%	416.28	180 / 180	89%	3.68	382 / 430
kidney	100%	301.76	89 / 89	80%	2.23	719 / 901
bladder	100%	279.05	21 / 21	80%	2.13	402 / 504
uterus	100%	530.82	170 / 170	80%	2.68	365 / 459
pancreas	87%	114.50	284 / 328	93%	3.21	165 / 178
intestine	100%	343.09	965 / 966	77%	1.77	404 / 527
lung	100%	711.47	577 / 578	74%	2.44	858 / 1155
liver	92%	185.26	208 / 226	79%	2.07	321 / 406
stomach	98%	207.80	353 / 359	59%	1.21	170 / 286
esophagus	96%	253.01	1388 / 1445	56%	1.15	102 / 183
skin	94%	291.84	1698 / 1809	53%	1.44	251 / 472
spleen	100%	455.29	241 / 241	0%	0	0 / 0
ureter	0%	0	0 / 0	100%	1.11	1 / 1
adipose	100%	323.97	1202 / 1204	0%	0	0 / 0
blood vessel	100%	336.00	1332 / 1335	0%	0	0 / 0
peripheral blood	98%	229.18	910 / 929	0%	0	0 / 0
heart	92%	149.83	793 / 861	0%	0	0 / 0
muscle	85%	128.46	680 / 803	0%	0	0 / 0
lymph node	0%	0	0 / 0	83%	1.63	24 / 29
eye	0%	0	0 / 0	63%	1.29	50 / 80
tonsil	0%	0	0 / 0	56%	1.05	25 / 45
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0