Name | Number of supported studies | Average coverage | |
---|---|---|---|
ciliated cell | 13 studies | 34% ± 12% | |
glutamatergic neuron | 7 studies | 45% ± 24% | |
retinal ganglion cell | 6 studies | 30% ± 13% | |
GABAergic neuron | 6 studies | 40% ± 18% | |
oligodendrocyte | 6 studies | 26% ± 7% | |
endothelial cell | 5 studies | 23% ± 4% | |
astrocyte | 5 studies | 28% ± 9% | |
interneuron | 4 studies | 42% ± 25% | |
retinal cone cell | 3 studies | 19% ± 3% | |
retinal rod cell | 3 studies | 22% ± 4% | |
oligodendrocyte precursor cell | 3 studies | 22% ± 4% | |
transit amplifying cell | 3 studies | 24% ± 5% | |
neuron | 3 studies | 30% ± 9% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 7 studies | 37% ± 19% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 544.92 | 1445 / 1445 | 100% | 6.38 | 183 / 183 |
uterus | 100% | 659.30 | 170 / 170 | 100% | 8.75 | 459 / 459 |
breast | 100% | 703.81 | 459 / 459 | 100% | 6.72 | 1117 / 1118 |
brain | 100% | 1142.44 | 2641 / 2642 | 100% | 4.92 | 704 / 705 |
prostate | 100% | 855.45 | 245 / 245 | 100% | 5.43 | 501 / 502 |
bladder | 100% | 584.33 | 21 / 21 | 100% | 6.45 | 502 / 504 |
lung | 100% | 908.94 | 576 / 578 | 100% | 6.73 | 1152 / 1155 |
stomach | 99% | 403.63 | 357 / 359 | 100% | 4.85 | 285 / 286 |
intestine | 100% | 652.74 | 966 / 966 | 99% | 4.66 | 521 / 527 |
thymus | 100% | 608.48 | 653 / 653 | 99% | 2.78 | 596 / 605 |
pancreas | 97% | 323.22 | 318 / 328 | 98% | 4.70 | 175 / 178 |
ovary | 100% | 434.07 | 180 / 180 | 94% | 2.92 | 406 / 430 |
skin | 99% | 603.22 | 1794 / 1809 | 91% | 3.15 | 428 / 472 |
kidney | 99% | 392.04 | 88 / 89 | 90% | 2.63 | 810 / 901 |
adrenal gland | 94% | 275.47 | 243 / 258 | 87% | 3.53 | 200 / 230 |
liver | 52% | 97.65 | 118 / 226 | 60% | 1.53 | 243 / 406 |
adipose | 100% | 741.58 | 1204 / 1204 | 0% | 0 | 0 / 0 |
spleen | 100% | 460.60 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 6.52 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 3.48 | 1 / 1 |
blood vessel | 99% | 473.75 | 1326 / 1335 | 0% | 0 | 0 / 0 |
heart | 99% | 461.89 | 849 / 861 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 97% | 2.30 | 28 / 29 |
muscle | 94% | 300.25 | 752 / 803 | 0% | 0 | 0 / 0 |
peripheral blood | 56% | 184.89 | 524 / 929 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 44% | 0.78 | 35 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0045190 | Biological process | isotype switching |
GO_0042802 | Molecular function | identical protein binding |
Gene name | SANBR |
Protein name | SANT and BTB domain regulator of class switch recombination (SANT and BTB domain regulator of CSR) SANT and BTB domain regulator of CSR |
Synonyms | KIAA1841 |
Description | FUNCTION: Negatively regulates class switch recombination or isotype switching in splenic B-cells. . |
Accessions | F8VWD7 ENST00000295031.9 [Q6NSI8-2] ENST00000453873.5 [Q6NSI8-1] ENST00000612149.1 [Q6NSI8-3] ENST00000356719.6 [Q6NSI8-2] ENST00000402291.6 [Q6NSI8-1] ENST00000453186.5 Q6NSI8 |