SAA4 report

Query

Invalid input gene. Please select from the suggestions.

I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
hepatocyte	5 studies	46% ± 32%	Explore

II. Expression across tissues

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
liver	100%	26805.37	226 / 226	57%	2.12	233 / 406
breast	92%	240.87	421 / 459	12%	0.33	132 / 1118
adipose	67%	100.71	807 / 1204	0%	0	0 / 0
lung	52%	46.95	302 / 578	14%	0.37	160 / 1155
muscle	55%	137.44	442 / 803	0%	0	0 / 0
prostate	45%	48.37	111 / 245	4%	0.07	18 / 502
adrenal gland	46%	14.89	119 / 258	0%	0.01	1 / 230
esophagus	21%	12.08	303 / 1445	22%	0.76	41 / 183
skin	33%	13.76	599 / 1809	0%	0.01	2 / 472
kidney	26%	9.75	23 / 89	7%	0.36	61 / 901
blood vessel	28%	8.52	368 / 1335	0%	0	0 / 0
stomach	14%	5.37	49 / 359	9%	0.27	26 / 286
peripheral blood	22%	38.82	204 / 929	0%	0	0 / 0
pancreas	10%	2.08	32 / 328	12%	0.52	21 / 178
bladder	14%	5.62	3 / 21	7%	0.15	33 / 504
intestine	10%	3.11	101 / 966	10%	0.24	54 / 527
uterus	9%	5.72	15 / 170	12%	0.30	54 / 459
thymus	9%	2.24	56 / 653	7%	0.22	44 / 605
brain	9%	1.81	245 / 2642	1%	0.03	10 / 705
spleen	10%	45.66	24 / 241	0%	0	0 / 0
ovary	2%	0.62	4 / 180	6%	0.18	27 / 430
heart	4%	1.49	34 / 861	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
eye	0%	0	0 / 0	0%	0	0 / 80
gingiva	0%	0	0 / 0	0%	0	0 / 0
lymph node	0%	0	0 / 0	0%	0	0 / 29
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
tonsil	0%	0	0 / 0	0%	0	0 / 45
ureter	0%	0	0 / 0	0%	0	0 / 1