Name | Number of supported studies | Average coverage | |
---|---|---|---|
astrocyte | 10 studies | 40% ± 19% | |
epithelial cell of proximal tubule | 6 studies | 34% ± 11% | |
oligodendrocyte | 6 studies | 28% ± 15% | |
abnormal cell | 4 studies | 35% ± 10% | |
mucus secreting cell | 3 studies | 21% ± 1% | |
Mueller cell | 3 studies | 36% ± 11% | |
progenitor cell of mammary luminal epithelium | 3 studies | 39% ± 15% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
kidney | 3 studies | 26% ± 8% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
thymus | 99% | 521.37 | 645 / 653 | 89% | 7.06 | 536 / 605 |
brain | 87% | 965.93 | 2304 / 2642 | 68% | 1.75 | 480 / 705 |
kidney | 88% | 458.22 | 78 / 89 | 61% | 2.38 | 550 / 901 |
skin | 32% | 69.04 | 586 / 1809 | 88% | 11.30 | 417 / 472 |
breast | 63% | 210.82 | 287 / 459 | 51% | 2.27 | 572 / 1118 |
muscle | 100% | 1946.18 | 803 / 803 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 1.31 | 1 / 1 |
heart | 99% | 2688.94 | 853 / 861 | 0% | 0 | 0 / 0 |
ovary | 1% | 0.86 | 1 / 180 | 96% | 17.75 | 411 / 430 |
eye | 0% | 0 | 0 / 0 | 95% | 10.66 | 76 / 80 |
lung | 36% | 77.34 | 207 / 578 | 26% | 0.51 | 306 / 1155 |
spleen | 57% | 113.74 | 138 / 241 | 0% | 0 | 0 / 0 |
esophagus | 19% | 38.70 | 281 / 1445 | 37% | 0.70 | 68 / 183 |
bladder | 19% | 30.29 | 4 / 21 | 28% | 0.51 | 142 / 504 |
adipose | 47% | 135.36 | 561 / 1204 | 0% | 0 | 0 / 0 |
uterus | 3% | 6.38 | 5 / 170 | 43% | 1.01 | 199 / 459 |
stomach | 28% | 57.72 | 101 / 359 | 13% | 0.22 | 37 / 286 |
prostate | 29% | 57.25 | 71 / 245 | 12% | 0.18 | 59 / 502 |
pancreas | 3% | 6.10 | 10 / 328 | 35% | 0.60 | 63 / 178 |
tonsil | 0% | 0 | 0 / 0 | 29% | 0.46 | 13 / 45 |
lymph node | 0% | 0 | 0 / 0 | 28% | 0.41 | 8 / 29 |
intestine | 9% | 16.92 | 86 / 966 | 15% | 0.29 | 81 / 527 |
adrenal gland | 16% | 30.32 | 40 / 258 | 3% | 0.06 | 6 / 230 |
liver | 2% | 3.02 | 4 / 226 | 11% | 0.33 | 44 / 406 |
blood vessel | 3% | 11.33 | 37 / 1335 | 0% | 0 | 0 / 0 |
peripheral blood | 2% | 3.46 | 16 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_1903672 | Biological process | positive regulation of sprouting angiogenesis |
GO_0035556 | Biological process | intracellular signal transduction |
GO_0021762 | Biological process | substantia nigra development |
GO_0051000 | Biological process | positive regulation of nitric-oxide synthase activity |
GO_0008016 | Biological process | regulation of heart contraction |
GO_0005576 | Cellular component | extracellular region |
GO_0005739 | Cellular component | mitochondrion |
GO_0032991 | Cellular component | protein-containing complex |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005794 | Cellular component | Golgi apparatus |
GO_0005829 | Cellular component | cytosol |
GO_0016529 | Cellular component | sarcoplasmic reticulum |
GO_0005737 | Cellular component | cytoplasm |
GO_0005634 | Cellular component | nucleus |
GO_0042803 | Molecular function | protein homodimerization activity |
GO_0042802 | Molecular function | identical protein binding |
GO_0048306 | Molecular function | calcium-dependent protein binding |
GO_0051117 | Molecular function | ATPase binding |
GO_0044548 | Molecular function | S100 protein binding |
GO_0005509 | Molecular function | calcium ion binding |
GO_0005515 | Molecular function | protein binding |
Gene name | S100A1 |
Protein name | Protein S100-A1 (S-100 protein alpha chain) (S-100 protein subunit alpha) (S100 calcium-binding protein A1) S100 calcium binding protein A1 Protein S100 (S100 calcium-binding protein) |
Synonyms | hCG_15470 S100A |
Description | FUNCTION: Small calcium binding protein that plays important roles in several biological processes such as Ca(2+) homeostasis, chondrocyte biology and cardiomyocyte regulation . In response to an increase in intracellular Ca(2+) levels, binds calcium which triggers conformational changes . These changes allow interactions with specific target proteins and modulate their activity . Regulates a network in cardiomyocytes controlling sarcoplasmic reticulum Ca(2+) cycling and mitochondrial function through interaction with the ryanodine receptors RYR1 and RYR2, sarcoplasmic reticulum Ca(2+)-ATPase/ATP2A2 and mitochondrial F1-ATPase . Facilitates diastolic Ca(2+) dissociation and myofilament mechanics in order to improve relaxation during diastole . . |
Accessions | ENST00000368696.3 Q5T7Y4 Q5T7Y6 ENST00000436839.1 ENST00000368698.3 P23297 A0A0S2Z4H2 ENST00000292169.6 Q5T7Y5 |