Insufficient scRNA-seq data for expression of RTL4 at single-cell level.
Insufficient scRNA-seq data for expression of RTL4 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
liver | 94% | 30.58 | 212 / 226 | 26% | 0.71 | 105 / 406 |
thymus | 34% | 3.33 | 225 / 653 | 66% | 12.23 | 398 / 605 |
kidney | 82% | 15.04 | 73 / 89 | 9% | 0.25 | 84 / 901 |
brain | 68% | 8.79 | 1785 / 2642 | 1% | 0.01 | 5 / 705 |
pancreas | 62% | 6.42 | 202 / 328 | 1% | 0.01 | 1 / 178 |
adrenal gland | 6% | 0.40 | 16 / 258 | 20% | 0.59 | 47 / 230 |
esophagus | 14% | 3.63 | 204 / 1445 | 0% | 0 | 0 / 183 |
prostate | 7% | 0.42 | 17 / 245 | 0% | 0.00 | 1 / 502 |
blood vessel | 4% | 0.25 | 58 / 1335 | 0% | 0 | 0 / 0 |
heart | 4% | 0.28 | 35 / 861 | 0% | 0 | 0 / 0 |
stomach | 3% | 0.19 | 10 / 359 | 1% | 0.02 | 2 / 286 |
uterus | 2% | 0.10 | 4 / 170 | 0% | 0.00 | 1 / 459 |
peripheral blood | 2% | 0.13 | 19 / 929 | 0% | 0 | 0 / 0 |
skin | 2% | 0.09 | 31 / 1809 | 0% | 0.01 | 1 / 472 |
breast | 2% | 0.09 | 7 / 459 | 0% | 0.00 | 1 / 1118 |
adipose | 1% | 0.06 | 15 / 1204 | 0% | 0 | 0 / 0 |
spleen | 1% | 0.07 | 3 / 241 | 0% | 0 | 0 / 0 |
lung | 1% | 0.04 | 5 / 578 | 0% | 0 | 0 / 1155 |
intestine | 0% | 0.02 | 4 / 966 | 0% | 0.01 | 2 / 527 |
ovary | 1% | 0.02 | 1 / 180 | 0% | 0.00 | 1 / 430 |
muscle | 1% | 0.04 | 5 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bladder | 0% | 0 | 0 / 21 | 0% | 0 | 0 / 504 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 80 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 45 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0050890 | Biological process | cognition |
GO_0042415 | Biological process | norepinephrine metabolic process |
GO_0005515 | Molecular function | protein binding |
GO_0008270 | Molecular function | zinc ion binding |
GO_0003676 | Molecular function | nucleic acid binding |
Gene name | RTL4 |
Protein name | Retrotransposon Gag-like protein 4 (Mammalian retrotransposon-derived protein 4) (Zinc finger CCHC domain-containing protein 16) Alternative protein ZCCHC16 |
Synonyms | MAR3 ZCCHC16 MART4 |
Description | FUNCTION: Involved in cognitive function in the brain, possibly via the noradrenergic system. . |
Accessions | L8EC62 ENST00000695808.1 ENST00000340433.4 Q6ZR62 ENST00000695839.1 |