Name | Number of supported studies | Average coverage | |
---|---|---|---|
kidney loop of Henle epithelial cell | 5 studies | 20% ± 2% | |
type B pancreatic cell | 4 studies | 42% ± 27% | |
retinal cone cell | 4 studies | 30% ± 10% | |
macrophage | 3 studies | 18% ± 2% | |
GABAergic neuron | 3 studies | 34% ± 4% | |
glutamatergic neuron | 3 studies | 40% ± 5% | |
pancreatic A cell | 3 studies | 31% ± 9% | |
ciliated cell | 3 studies | 20% ± 0% | |
interneuron | 3 studies | 34% ± 18% | |
oligodendrocyte | 3 studies | 17% ± 1% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 2769.98 | 2637 / 2642 | 100% | 59.62 | 703 / 705 |
kidney | 100% | 3004.66 | 89 / 89 | 97% | 49.12 | 878 / 901 |
thymus | 100% | 2648.36 | 652 / 653 | 97% | 37.27 | 589 / 605 |
prostate | 97% | 1230.78 | 237 / 245 | 99% | 25.33 | 496 / 502 |
adrenal gland | 100% | 2346.27 | 258 / 258 | 93% | 22.97 | 215 / 230 |
lung | 97% | 1602.69 | 560 / 578 | 82% | 17.21 | 952 / 1155 |
skin | 72% | 1231.07 | 1299 / 1809 | 98% | 42.64 | 462 / 472 |
pancreas | 82% | 734.69 | 269 / 328 | 82% | 11.50 | 146 / 178 |
breast | 99% | 1467.15 | 453 / 459 | 63% | 9.98 | 705 / 1118 |
esophagus | 99% | 2168.25 | 1432 / 1445 | 51% | 7.55 | 94 / 183 |
bladder | 95% | 1522.24 | 20 / 21 | 45% | 8.32 | 228 / 504 |
liver | 56% | 506.01 | 126 / 226 | 83% | 17.14 | 338 / 406 |
eye | 0% | 0 | 0 / 0 | 100% | 53.72 | 80 / 80 |
muscle | 100% | 9239.95 | 803 / 803 | 0% | 0 | 0 / 0 |
blood vessel | 99% | 1609.19 | 1324 / 1335 | 0% | 0 | 0 / 0 |
adipose | 98% | 1512.25 | 1175 / 1204 | 0% | 0 | 0 / 0 |
intestine | 71% | 741.48 | 689 / 966 | 25% | 3.18 | 132 / 527 |
heart | 96% | 4601.00 | 825 / 861 | 0% | 0 | 0 / 0 |
spleen | 95% | 957.42 | 230 / 241 | 0% | 0 | 0 / 0 |
peripheral blood | 94% | 2099.95 | 870 / 929 | 0% | 0 | 0 / 0 |
uterus | 21% | 206.19 | 36 / 170 | 72% | 17.14 | 330 / 459 |
lymph node | 0% | 0 | 0 / 0 | 90% | 21.32 | 26 / 29 |
ovary | 14% | 102.24 | 25 / 180 | 68% | 10.38 | 293 / 430 |
tonsil | 0% | 0 | 0 / 0 | 80% | 13.92 | 36 / 45 |
stomach | 26% | 234.58 | 95 / 359 | 34% | 4.33 | 96 / 286 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_1990253 | Biological process | cellular response to leucine starvation |
GO_0009267 | Biological process | cellular response to starvation |
GO_0071230 | Biological process | cellular response to amino acid stimulus |
GO_0010507 | Biological process | negative regulation of autophagy |
GO_0008104 | Biological process | protein localization |
GO_1904263 | Biological process | positive regulation of TORC1 signaling |
GO_0032008 | Biological process | positive regulation of TOR signaling |
GO_0071233 | Biological process | cellular response to L-leucine |
GO_0005813 | Cellular component | centrosome |
GO_0005764 | Cellular component | lysosome |
GO_0005654 | Cellular component | nucleoplasm |
GO_1990131 | Cellular component | Gtr1-Gtr2 GTPase complex |
GO_0005829 | Cellular component | cytosol |
GO_0005737 | Cellular component | cytoplasm |
GO_0043231 | Cellular component | intracellular membrane-bounded organelle |
GO_0005765 | Cellular component | lysosomal membrane |
GO_0005634 | Cellular component | nucleus |
GO_0019003 | Molecular function | GDP binding |
GO_0060090 | Molecular function | molecular adaptor activity |
GO_0051020 | Molecular function | GTPase binding |
GO_0005525 | Molecular function | GTP binding |
GO_0046982 | Molecular function | protein heterodimerization activity |
GO_0005515 | Molecular function | protein binding |
GO_0003924 | Molecular function | GTPase activity |
Gene name | RRAGD |
Protein name | Ras-related GTP-binding protein D (Rag D) (RagD) (EC 3.6.5.-) |
Synonyms | |
Description | FUNCTION: Guanine nucleotide-binding protein that plays a crucial role in the cellular response to amino acid availability through regulation of the mTORC1 signaling cascade . Forms heterodimeric Rag complexes with RagA/RRAGA or RagB/RRAGB and cycles between an inactive GTP-bound and an active GDP-bound form: RagD/RRAGD is in its active form when GDP-bound RagD/RRAGD forms a complex with GTP-bound RagA/RRAGA (or RagB/RRAGB) and in an inactive form when GTP-bound RagD/RRAGD heterodimerizes with GDP-bound RagA/RRAGA (or RagB/RRAGB) . In its active form, promotes the recruitment of mTORC1 to the lysosomes and its subsequent activation by the GTPase RHEB . This is a crucial step in the activation of the MTOR signaling cascade by amino acids . Also plays a central role in the non-canonical mTORC1 complex, which acts independently of RHEB and specifically mediates phosphorylation of MiT/TFE factors TFEB and TFE3: GDP-bound RagD/RRAGD mediates recruitment of MiT/TFE factors TFEB and TFE3 . . |
Accessions | Q9NQL2 ENST00000369415.9 [Q9NQL2-1] ENST00000359203.3 [Q9NQL2-2] |