RPE report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
glutamatergic neuron	6 studies	39% ± 22%	Explore
epithelial cell	5 studies	23% ± 5%	Explore
oligodendrocyte	5 studies	20% ± 5%	Explore
endothelial cell	4 studies	23% ± 5%	Explore
macrophage	4 studies	19% ± 4%	Explore
GABAergic neuron	4 studies	38% ± 14%	Explore
microglial cell	3 studies	19% ± 2%	Explore
astrocyte	3 studies	22% ± 7%	Explore
oligodendrocyte precursor cell	3 studies	25% ± 7%	Explore
dendritic cell	3 studies	27% ± 6%	Explore
basal cell	3 studies	21% ± 2%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
brain	5 studies	37% ± 16%	Explore
liver	3 studies	21% ± 2%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
breast	100%	1530.91	459 / 459	100%	40.50	1118 / 1118
esophagus	100%	1480.57	1445 / 1445	100%	33.43	183 / 183
brain	100%	1243.17	2639 / 2642	100%	31.37	705 / 705
lung	100%	1362.18	577 / 578	100%	37.22	1155 / 1155
prostate	100%	1506.73	245 / 245	100%	30.87	501 / 502
ovary	100%	1434.12	180 / 180	100%	33.84	429 / 430
stomach	100%	1024.48	359 / 359	100%	34.11	285 / 286
intestine	100%	1317.96	966 / 966	100%	37.22	525 / 527
uterus	100%	1551.89	170 / 170	99%	33.21	455 / 459
thymus	100%	1557.39	653 / 653	99%	29.69	599 / 605
bladder	100%	1803.95	21 / 21	99%	32.59	499 / 504
kidney	100%	1514.06	89 / 89	98%	27.86	882 / 901
pancreas	99%	616.08	326 / 328	98%	30.56	175 / 178
skin	100%	1659.54	1807 / 1809	97%	33.68	458 / 472
adrenal gland	100%	1913.54	258 / 258	95%	22.51	218 / 230
liver	100%	839.71	226 / 226	94%	16.71	383 / 406
adipose	100%	1611.89	1204 / 1204	0%	0	0 / 0
blood vessel	100%	1502.09	1335 / 1335	0%	0	0 / 0
lymph node	0%	0	0 / 0	100%	27.27	29 / 29
spleen	100%	971.94	241 / 241	0%	0	0 / 0
tonsil	0%	0	0 / 0	100%	31.79	45 / 45
muscle	96%	482.58	769 / 803	0%	0	0 / 0
heart	95%	747.86	818 / 861	0%	0	0 / 0
eye	0%	0	0 / 0	78%	13.07	62 / 80
peripheral blood	74%	839.90	683 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
ureter	0%	0	0 / 0	0%	0	0 / 1