RP2 | OmnibusX

sc-RNAseq data

Insufficient scRNA-seq data for expression of RP2 at tissue level.

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
esophagus	100%	864.96	1445 / 1445	100%	28.02	183 / 183
lung	100%	1141.35	578 / 578	100%	21.71	1154 / 1155
intestine	100%	734.33	966 / 966	100%	24.86	525 / 527
ovary	100%	601.98	180 / 180	99%	14.68	426 / 430
stomach	99%	490.15	356 / 359	100%	26.49	285 / 286
breast	100%	774.46	459 / 459	98%	21.21	1099 / 1118
bladder	100%	588.95	21 / 21	98%	19.56	492 / 504
uterus	100%	608.31	170 / 170	96%	17.01	440 / 459
thymus	100%	591.72	652 / 653	96%	13.84	579 / 605
prostate	100%	482.35	245 / 245	95%	14.73	479 / 502
kidney	98%	373.51	87 / 89	97%	22.44	876 / 901
adrenal gland	100%	940.03	258 / 258	94%	13.43	216 / 230
brain	92%	296.35	2435 / 2642	99%	23.71	698 / 705
skin	99%	842.45	1797 / 1809	92%	16.99	432 / 472
pancreas	86%	234.72	281 / 328	98%	19.04	174 / 178
liver	100%	494.94	226 / 226	82%	8.74	332 / 406
adipose	100%	974.78	1204 / 1204	0%	0	0 / 0
spleen	100%	949.12	241 / 241	0%	0	0 / 0
ureter	0%	0	0 / 0	100%	7.05	1 / 1
blood vessel	100%	788.63	1333 / 1335	0%	0	0 / 0
peripheral blood	98%	1660.55	915 / 929	0%	0	0 / 0
tonsil	0%	0	0 / 0	96%	17.23	43 / 45
lymph node	0%	0	0 / 0	93%	20.54	27 / 29
heart	90%	320.40	775 / 861	0%	0	0 / 0
muscle	59%	118.71	477 / 803	0%	0	0 / 0
eye	0%	0	0 / 0	50%	3.68	40 / 80
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0

GO_0060271	Biological process	cilium assembly
GO_0007601	Biological process	visual perception
GO_0007023	Biological process	post-chaperonin tubulin folding pathway
GO_0006892	Biological process	post-Golgi vesicle-mediated transport
GO_0006457	Biological process	protein folding
GO_0015031	Biological process	protein transport
GO_1990075	Cellular component	periciliary membrane compartment
GO_0005886	Cellular component	plasma membrane
GO_0031410	Cellular component	cytoplasmic vesicle
GO_0070062	Cellular component	extracellular exosome
GO_0005654	Cellular component	nucleoplasm
GO_0005794	Cellular component	Golgi apparatus
GO_0005814	Cellular component	centriole
GO_0005929	Cellular component	cilium
GO_0016604	Cellular component	nuclear body
GO_0005737	Cellular component	cytoplasm
GO_0036064	Cellular component	ciliary basal body
GO_0000287	Molecular function	magnesium ion binding
GO_0005096	Molecular function	GTPase activator activity
GO_0051082	Molecular function	unfolded protein binding
GO_0005525	Molecular function	GTP binding
GO_0005515	Molecular function	protein binding

Gene name	RP2
Protein name	Protein XRP2
Synonyms	hCG_15708
Description	FUNCTION: Acts as a GTPase-activating protein (GAP) involved in trafficking between the Golgi and the ciliary membrane. Involved in localization of proteins, such as NPHP3, to the cilium membrane by inducing hydrolysis of GTP ARL3, leading to the release of UNC119 (or UNC119B). Acts as a GTPase-activating protein (GAP) for tubulin in concert with tubulin-specific chaperone C, but does not enhance tubulin heterodimerization. Acts as a guanine nucleotide dissociation inhibitor towards ADP-ribosylation factor-like proteins. . FUNCTION: Acts as a GTPase-activating protein (GAP) for tubulin in concert with tubulin-specific chaperone C, but does not enhance tubulin heterodimerization. .
Accessions	O75695 ENST00000218340.4 A0A1B2JLU2

RP2 report