Name | Number of supported studies | Average coverage | |
---|---|---|---|
oligodendrocyte precursor cell | 14 studies | 50% ± 17% | |
astrocyte | 13 studies | 33% ± 16% | |
glutamatergic neuron | 12 studies | 50% ± 22% | |
GABAergic neuron | 11 studies | 45% ± 21% | |
microglial cell | 11 studies | 34% ± 14% | |
macrophage | 8 studies | 41% ± 13% | |
adipocyte | 8 studies | 44% ± 11% | |
retinal cone cell | 7 studies | 49% ± 22% | |
smooth muscle cell | 7 studies | 25% ± 8% | |
endothelial cell | 6 studies | 38% ± 20% | |
interneuron | 6 studies | 50% ± 17% | |
cardiac muscle cell | 6 studies | 59% ± 24% | |
neuron | 5 studies | 36% ± 12% | |
fibroblast | 5 studies | 27% ± 12% | |
granule cell | 4 studies | 36% ± 6% | |
retinal bipolar neuron | 4 studies | 32% ± 16% | |
retinal pigment epithelial cell | 4 studies | 48% ± 14% | |
amacrine cell | 4 studies | 31% ± 9% | |
retina horizontal cell | 4 studies | 38% ± 14% | |
retinal rod cell | 4 studies | 56% ± 11% | |
pericyte | 4 studies | 21% ± 8% | |
GABAergic interneuron | 3 studies | 45% ± 5% | |
GABAergic amacrine cell | 3 studies | 37% ± 12% | |
Mueller cell | 3 studies | 38% ± 13% | |
glycinergic amacrine cell | 3 studies | 44% ± 11% | |
rod bipolar cell | 3 studies | 53% ± 23% | |
myeloid cell | 3 studies | 28% ± 9% | |
kidney distal convoluted tubule epithelial cell | 3 studies | 34% ± 10% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
ovary | 100% | 3111.58 | 180 / 180 | 99% | 17.50 | 425 / 430 |
prostate | 98% | 2253.59 | 241 / 245 | 98% | 11.30 | 491 / 502 |
adrenal gland | 100% | 4790.76 | 258 / 258 | 96% | 15.37 | 220 / 230 |
brain | 89% | 1843.30 | 2344 / 2642 | 96% | 10.60 | 674 / 705 |
breast | 97% | 1560.48 | 444 / 459 | 55% | 3.82 | 616 / 1118 |
thymus | 98% | 1814.54 | 642 / 653 | 51% | 2.98 | 310 / 605 |
kidney | 99% | 1691.25 | 88 / 89 | 45% | 2.90 | 405 / 901 |
uterus | 99% | 4141.77 | 169 / 170 | 41% | 4.90 | 188 / 459 |
esophagus | 81% | 3065.49 | 1170 / 1445 | 41% | 3.38 | 75 / 183 |
bladder | 95% | 2976.38 | 20 / 21 | 18% | 1.10 | 92 / 504 |
skin | 33% | 265.64 | 597 / 1809 | 77% | 8.36 | 365 / 472 |
intestine | 84% | 4930.61 | 814 / 966 | 19% | 1.00 | 98 / 527 |
blood vessel | 99% | 2087.98 | 1318 / 1335 | 0% | 0 | 0 / 0 |
spleen | 98% | 1987.86 | 237 / 241 | 0% | 0 | 0 / 0 |
adipose | 98% | 1900.54 | 1175 / 1204 | 0% | 0 | 0 / 0 |
heart | 93% | 3030.45 | 799 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 88% | 6.38 | 70 / 80 |
stomach | 48% | 1705.07 | 172 / 359 | 34% | 2.69 | 98 / 286 |
muscle | 78% | 1294.55 | 627 / 803 | 0% | 0 | 0 / 0 |
lung | 40% | 289.19 | 230 / 578 | 33% | 2.58 | 385 / 1155 |
pancreas | 13% | 86.23 | 43 / 328 | 54% | 2.98 | 96 / 178 |
tonsil | 0% | 0 | 0 / 0 | 51% | 7.40 | 23 / 45 |
lymph node | 0% | 0 | 0 / 0 | 24% | 0.81 | 7 / 29 |
liver | 2% | 12.36 | 5 / 226 | 7% | 0.64 | 30 / 406 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
peripheral blood | 0% | 0 | 0 / 929 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0006511 | Biological process | ubiquitin-dependent protein catabolic process |
GO_0016020 | Cellular component | membrane |
GO_0005737 | Cellular component | cytoplasm |
GO_0061630 | Molecular function | ubiquitin protein ligase activity |
GO_0046872 | Molecular function | metal ion binding |
Gene name | RNF150 |
Protein name | RING finger protein 150 Ring finger protein 150 |
Synonyms | KIAA1214 |
Description | |
Accessions | ENST00000506101.2 ENST00000507500.5 [Q9ULK6-3] ENST00000420921.6 [Q9ULK6-4] ENST00000306799.7 [Q9ULK6-2] ENST00000515673.7 [Q9ULK6-1] D6RIE5 Q9ULK6 |