Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 6 studies | 21% ± 6% | |
epithelial cell | 4 studies | 30% ± 5% | |
glutamatergic neuron | 4 studies | 33% ± 17% | |
GABAergic neuron | 3 studies | 32% ± 11% | |
basal cell | 3 studies | 24% ± 7% | |
neuron | 3 studies | 23% ± 6% | |
oligodendrocyte | 3 studies | 16% ± 0% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 4 studies | 28% ± 11% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
adrenal gland | 100% | 2554.34 | 258 / 258 | 100% | 17.90 | 230 / 230 |
esophagus | 100% | 4477.68 | 1445 / 1445 | 100% | 15.21 | 183 / 183 |
intestine | 100% | 2690.08 | 966 / 966 | 100% | 15.48 | 527 / 527 |
ovary | 100% | 2154.71 | 180 / 180 | 100% | 18.23 | 430 / 430 |
prostate | 100% | 2674.49 | 245 / 245 | 100% | 19.85 | 502 / 502 |
stomach | 100% | 2275.96 | 359 / 359 | 100% | 13.91 | 286 / 286 |
thymus | 100% | 2793.55 | 653 / 653 | 100% | 24.65 | 605 / 605 |
uterus | 100% | 2746.09 | 170 / 170 | 100% | 19.42 | 459 / 459 |
kidney | 100% | 2369.61 | 89 / 89 | 100% | 17.19 | 900 / 901 |
brain | 100% | 2226.71 | 2639 / 2642 | 100% | 22.66 | 705 / 705 |
breast | 100% | 2417.03 | 459 / 459 | 100% | 27.68 | 1116 / 1118 |
bladder | 100% | 2715.48 | 21 / 21 | 100% | 15.09 | 503 / 504 |
liver | 100% | 1596.85 | 226 / 226 | 100% | 12.43 | 405 / 406 |
pancreas | 100% | 1505.87 | 327 / 328 | 100% | 13.62 | 178 / 178 |
lung | 100% | 2322.32 | 576 / 578 | 100% | 14.73 | 1155 / 1155 |
skin | 100% | 2691.59 | 1809 / 1809 | 100% | 14.94 | 470 / 472 |
adipose | 100% | 2196.42 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 2717.93 | 1335 / 1335 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 15.83 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 20.31 | 29 / 29 |
muscle | 100% | 3038.71 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 2452.65 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 21.90 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 9.78 | 1 / 1 |
heart | 99% | 1977.66 | 856 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 87% | 1292.54 | 809 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0043161 | Biological process | proteasome-mediated ubiquitin-dependent protein catabolic process |
GO_0005829 | Cellular component | cytosol |
GO_0034657 | Cellular component | GID complex |
GO_0005737 | Cellular component | cytoplasm |
GO_0005634 | Cellular component | nucleus |
GO_0061630 | Molecular function | ubiquitin protein ligase activity |
GO_0004842 | Molecular function | ubiquitin-protein transferase activity |
GO_0005515 | Molecular function | protein binding |
GO_0046872 | Molecular function | metal ion binding |
Gene name | RMND5B |
Protein name | E3 ubiquitin-protein transferase RMND5B (EC 2.3.2.27) (Protein RMD5 homolog B) RING-type E3 ubiquitin transferase (EC 2.3.2.27) Required for meiotic nuclear division 5 homolog B |
Synonyms | UNQ2508/PRO5996 |
Description | FUNCTION: Core component of the CTLH E3 ubiquitin-protein ligase complex that selectively accepts ubiquitin from UBE2H and mediates ubiquitination and subsequent proteasomal degradation of the transcription factor HBP1. MAEA and RMND5A are both required for catalytic activity of the CTLH E3 ubiquitin-protein ligase complex . Catalytic activity of the complex is required for normal cell proliferation . The CTLH E3 ubiquitin-protein ligase complex is not required for the degradation of enzymes involved in gluconeogenesis, such as FBP1 . . |
Accessions | ENST00000313386.9 [Q96G75-1] D6R9A2 D6RFE6 D6RIF9 ENST00000502814.5 ENST00000512663.5 ENST00000515098.5 [Q96G75-1] F5H6G4 ENST00000542098.2 D6RER3 D6RFK1 ENST00000512811.5 Q96G75 ENST00000507457.5 ENST00000508647.5 |