Name | Number of supported studies | Average coverage | |
---|---|---|---|
epithelial cell | 3 studies | 25% ± 4% |
Insufficient scRNA-seq data for expression of RIOK2 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
breast | 100% | 1111.73 | 459 / 459 | 100% | 17.70 | 1118 / 1118 |
esophagus | 100% | 960.71 | 1445 / 1445 | 100% | 9.82 | 183 / 183 |
liver | 100% | 602.29 | 226 / 226 | 100% | 8.59 | 406 / 406 |
ovary | 100% | 1164.03 | 180 / 180 | 100% | 8.54 | 430 / 430 |
pancreas | 100% | 797.02 | 328 / 328 | 100% | 10.94 | 178 / 178 |
prostate | 100% | 893.62 | 245 / 245 | 100% | 12.32 | 502 / 502 |
uterus | 100% | 1123.76 | 170 / 170 | 100% | 12.42 | 459 / 459 |
bladder | 100% | 1067.43 | 21 / 21 | 100% | 11.15 | 503 / 504 |
thymus | 100% | 1012.78 | 653 / 653 | 100% | 13.49 | 603 / 605 |
lung | 100% | 857.98 | 576 / 578 | 100% | 10.83 | 1155 / 1155 |
stomach | 100% | 949.55 | 359 / 359 | 100% | 11.36 | 285 / 286 |
brain | 100% | 718.56 | 2632 / 2642 | 100% | 13.81 | 705 / 705 |
adrenal gland | 100% | 1047.44 | 258 / 258 | 100% | 14.92 | 229 / 230 |
kidney | 100% | 646.80 | 89 / 89 | 99% | 11.07 | 896 / 901 |
intestine | 100% | 1098.63 | 966 / 966 | 99% | 12.60 | 521 / 527 |
skin | 100% | 1339.88 | 1809 / 1809 | 99% | 13.74 | 465 / 472 |
adipose | 100% | 1149.42 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 1005.29 | 1335 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 15.05 | 29 / 29 |
muscle | 100% | 1054.58 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 1054.47 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 11.80 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 2.71 | 1 / 1 |
heart | 98% | 721.18 | 840 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 95% | 8.64 | 76 / 80 |
peripheral blood | 71% | 592.82 | 658 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_2000234 | Biological process | positive regulation of rRNA processing |
GO_2000208 | Biological process | positive regulation of ribosomal small subunit export from nucleus |
GO_0030071 | Biological process | regulation of mitotic metaphase/anaphase transition |
GO_0042274 | Biological process | ribosomal small subunit biogenesis |
GO_0046777 | Biological process | protein autophosphorylation |
GO_0030490 | Biological process | maturation of SSU-rRNA |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005829 | Cellular component | cytosol |
GO_0030688 | Cellular component | preribosome, small subunit precursor |
GO_0005737 | Cellular component | cytoplasm |
GO_0005634 | Cellular component | nucleus |
GO_0005524 | Molecular function | ATP binding |
GO_0004674 | Molecular function | protein serine/threonine kinase activity |
GO_0106310 | Molecular function | protein serine kinase activity |
GO_0005515 | Molecular function | protein binding |
GO_0046872 | Molecular function | metal ion binding |
GO_0004672 | Molecular function | protein kinase activity |
Gene name | RIOK2 |
Protein name | RIO kinase 2 Serine/threonine-protein kinase RIO2 (EC 2.7.11.1) (RIO kinase 2) |
Synonyms | RIO2 |
Description | FUNCTION: Serine/threonine-protein kinase involved in the final steps of cytoplasmic maturation of the 40S ribosomal subunit. Involved in export of the 40S pre-ribosome particles (pre-40S) from the nucleus to the cytoplasm. Its kinase activity is required for the release of NOB1, PNO1 and LTV1 from the late pre-40S and the processing of 18S-E pre-rRNA to the mature 18S rRNA . Regulates the timing of the metaphase-anaphase transition during mitotic progression, and its phosphorylation, most likely by PLK1, regulates this function . . |
Accessions | D6RB96 ENST00000283109.8 [Q9BVS4-1] ENST00000510384.1 H0Y919 H0Y8R4 ENST00000511293.1 Q9BVS4 ENST00000508447.1 [Q9BVS4-2] ENST00000511012.1 |