Name | Number of supported studies | Average coverage | |
---|---|---|---|
oligodendrocyte | 10 studies | 30% ± 10% | |
endothelial cell | 9 studies | 26% ± 7% | |
astrocyte | 6 studies | 33% ± 12% | |
cardiac muscle cell | 5 studies | 43% ± 8% | |
type I pneumocyte | 5 studies | 22% ± 6% | |
glutamatergic neuron | 4 studies | 46% ± 18% | |
fibroblast | 4 studies | 19% ± 3% | |
microglial cell | 3 studies | 17% ± 2% | |
epithelial cell | 3 studies | 32% ± 11% | |
GABAergic neuron | 3 studies | 39% ± 8% | |
oligodendrocyte precursor cell | 3 studies | 27% ± 7% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
prostate | 100% | 943.56 | 245 / 245 | 100% | 4.91 | 502 / 502 |
skin | 100% | 756.43 | 1808 / 1809 | 100% | 7.18 | 472 / 472 |
brain | 100% | 1072.17 | 2639 / 2642 | 100% | 9.43 | 704 / 705 |
thymus | 100% | 1574.75 | 653 / 653 | 99% | 7.02 | 601 / 605 |
kidney | 100% | 582.31 | 89 / 89 | 99% | 4.98 | 895 / 901 |
adrenal gland | 100% | 849.75 | 258 / 258 | 99% | 5.00 | 227 / 230 |
breast | 100% | 796.30 | 459 / 459 | 98% | 3.75 | 1100 / 1118 |
ovary | 100% | 781.44 | 180 / 180 | 98% | 3.61 | 421 / 430 |
uterus | 100% | 1069.74 | 170 / 170 | 98% | 4.20 | 448 / 459 |
lung | 99% | 688.31 | 575 / 578 | 98% | 3.58 | 1129 / 1155 |
bladder | 100% | 898.19 | 21 / 21 | 96% | 3.57 | 482 / 504 |
esophagus | 99% | 910.51 | 1435 / 1445 | 96% | 3.60 | 175 / 183 |
intestine | 87% | 679.20 | 845 / 966 | 91% | 2.19 | 477 / 527 |
stomach | 69% | 413.81 | 248 / 359 | 92% | 2.45 | 262 / 286 |
pancreas | 48% | 138.81 | 159 / 328 | 97% | 3.32 | 172 / 178 |
liver | 56% | 159.46 | 126 / 226 | 81% | 1.93 | 330 / 406 |
eye | 0% | 0 | 0 / 0 | 100% | 8.95 | 80 / 80 |
muscle | 100% | 2562.39 | 803 / 803 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 2.83 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 3.29 | 1 / 1 |
blood vessel | 100% | 1516.09 | 1334 / 1335 | 0% | 0 | 0 / 0 |
adipose | 100% | 761.40 | 1203 / 1204 | 0% | 0 | 0 / 0 |
spleen | 98% | 437.88 | 237 / 241 | 0% | 0 | 0 / 0 |
heart | 98% | 3204.49 | 845 / 861 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 59% | 0.79 | 17 / 29 |
peripheral blood | 32% | 105.22 | 296 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0060271 | Biological process | cilium assembly |
GO_0003382 | Biological process | epithelial cell morphogenesis |
GO_1903445 | Biological process | protein transport from ciliary membrane to plasma membrane |
GO_0007263 | Biological process | nitric oxide mediated signal transduction |
GO_0005814 | Cellular component | centriole |
GO_0005813 | Cellular component | centrosome |
GO_0005929 | Cellular component | cilium |
GO_0036064 | Cellular component | ciliary basal body |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005829 | Cellular component | cytosol |
GO_0005886 | Cellular component | plasma membrane |
GO_0005737 | Cellular component | cytoplasm |
GO_0051959 | Molecular function | dynein light intermediate chain binding |
GO_0046983 | Molecular function | protein dimerization activity |
GO_0005515 | Molecular function | protein binding |
GO_0031267 | Molecular function | small GTPase binding |
Gene name | RILPL1 |
Protein name | RILP-like protein 1 (Rab-interacting lysosomal-like protein 1) Rab interacting lysosomal protein like 1 |
Synonyms | RLP1 |
Description | FUNCTION: Plays a role in the regulation of cell shape and polarity (By similarity). Plays a role in cellular protein transport, including protein transport away from primary cilia (By similarity). Neuroprotective protein, which acts by sequestring GAPDH in the cytosol and prevent the apoptotic function of GAPDH in the nucleus (By similarity). Competes with SIAH1 for binding GAPDH (By similarity). Does not regulate lysosomal morphology and distribution . Binds to RAB10 following LRRK2-mediated RAB10 phosphorylation which leads to inhibition of ciliogenesis . . |
Accessions | Q5EBL4 ENST00000636882.1 ENST00000376874.9 [Q5EBL4-1] A0A1B0GVV3 |