Name | Number of supported studies | Average coverage | |
---|---|---|---|
GABAergic neuron | 3 studies | 35% ± 6% | |
glutamatergic neuron | 3 studies | 45% ± 6% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 4 studies | 31% ± 8% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
ovary | 100% | 610.23 | 180 / 180 | 100% | 10.60 | 430 / 430 |
brain | 100% | 465.88 | 2640 / 2642 | 100% | 19.34 | 705 / 705 |
stomach | 100% | 351.36 | 358 / 359 | 100% | 10.47 | 285 / 286 |
intestine | 100% | 513.37 | 966 / 966 | 99% | 10.34 | 523 / 527 |
thymus | 100% | 496.29 | 653 / 653 | 99% | 9.83 | 599 / 605 |
breast | 100% | 475.44 | 459 / 459 | 99% | 7.42 | 1104 / 1118 |
prostate | 100% | 469.78 | 245 / 245 | 99% | 9.42 | 495 / 502 |
pancreas | 100% | 300.03 | 327 / 328 | 98% | 6.24 | 175 / 178 |
lung | 100% | 426.03 | 576 / 578 | 98% | 7.39 | 1134 / 1155 |
esophagus | 99% | 367.13 | 1437 / 1445 | 98% | 8.75 | 180 / 183 |
bladder | 100% | 458.62 | 21 / 21 | 97% | 8.03 | 491 / 504 |
uterus | 100% | 722.85 | 170 / 170 | 97% | 9.33 | 443 / 459 |
kidney | 100% | 284.87 | 89 / 89 | 92% | 5.61 | 825 / 901 |
adrenal gland | 99% | 301.12 | 256 / 258 | 90% | 5.97 | 207 / 230 |
skin | 99% | 324.11 | 1794 / 1809 | 85% | 5.73 | 403 / 472 |
liver | 90% | 152.80 | 204 / 226 | 46% | 1.80 | 187 / 406 |
adipose | 100% | 478.69 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 459.64 | 1335 / 1335 | 0% | 0 | 0 / 0 |
spleen | 100% | 497.45 | 241 / 241 | 0% | 0 | 0 / 0 |
muscle | 99% | 280.61 | 797 / 803 | 0% | 0 | 0 / 0 |
heart | 97% | 224.34 | 837 / 861 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 93% | 10.85 | 27 / 29 |
tonsil | 0% | 0 | 0 / 0 | 84% | 5.47 | 38 / 45 |
peripheral blood | 67% | 245.81 | 622 / 929 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 63% | 2.94 | 50 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0045348 | Biological process | positive regulation of MHC class II biosynthetic process |
GO_0045944 | Biological process | positive regulation of transcription by RNA polymerase II |
GO_0006357 | Biological process | regulation of transcription by RNA polymerase II |
GO_0016607 | Cellular component | nuclear speck |
GO_0090575 | Cellular component | RNA polymerase II transcription regulator complex |
GO_0005634 | Cellular component | nucleus |
GO_0001228 | Molecular function | DNA-binding transcription activator activity, RNA polymerase II-specific |
GO_0000977 | Molecular function | RNA polymerase II transcription regulatory region sequence-specific DNA binding |
GO_0005515 | Molecular function | protein binding |
Gene name | RFXAP |
Protein name | Regulatory factor X-associated protein (RFX-associated protein) (RFX DNA-binding complex 36 kDa subunit) |
Synonyms | |
Description | FUNCTION: Part of the RFX complex that binds to the X-box of MHC II promoters. |
Accessions | O00287 ENST00000255476.3 |