RETNLB report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
goblet cell	5 studies	53% ± 15%	Explore

II. Expression across tissues

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
intestine	49%	701.75	475 / 966	73%	45.85	387 / 527
ureter	0%	0	0 / 0	100%	1.27	1 / 1
stomach	0%	0	0 / 359	55%	15.37	157 / 286
bladder	0%	0	0 / 21	27%	8.38	138 / 504
esophagus	0%	0.07	1 / 1445	25%	1.24	45 / 183
lung	0%	0	0 / 578	12%	0.65	138 / 1155
tonsil	0%	0	0 / 0	9%	0.12	4 / 45
pancreas	0%	0	0 / 328	7%	2.38	13 / 178
ovary	0%	0	0 / 180	5%	0.10	20 / 430
liver	0%	0	0 / 226	4%	0.08	15 / 406
thymus	0%	0	0 / 653	2%	0.03	14 / 605
uterus	0%	0	0 / 170	1%	0.20	6 / 459
breast	0%	2.81	1 / 459	1%	0.01	7 / 1118
prostate	0%	0	0 / 245	1%	0.01	4 / 502
kidney	0%	0	0 / 89	0%	0.01	4 / 901
skin	0%	0	0 / 1809	0%	0.01	2 / 472
abdomen	0%	0	0 / 0	0%	0	0 / 0
adipose	0%	0	0 / 1204	0%	0	0 / 0
adrenal gland	0%	0	0 / 258	0%	0	0 / 230
blood vessel	0%	0	0 / 1335	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
brain	0%	0	0 / 2642	0%	0	0 / 705
diaphragm	0%	0	0 / 0	0%	0	0 / 0
eye	0%	0	0 / 0	0%	0	0 / 80
gingiva	0%	0	0 / 0	0%	0	0 / 0
heart	0%	0	0 / 861	0%	0	0 / 0
lymph node	0%	0	0 / 0	0%	0	0 / 29
muscle	0%	0	0 / 803	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
peripheral blood	0%	0	0 / 929	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
spleen	0%	0	0 / 241	0%	0	0 / 0