REP15 report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
goblet cell	9 studies	55% ± 14%	Explore

II. Expression across tissues

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
intestine	95%	103.69	918 / 966	37%	1.82	194 / 527
stomach	92%	114.82	329 / 359	26%	1.05	74 / 286
kidney	89%	13.24	79 / 89	22%	0.34	197 / 901
ovary	95%	18.34	171 / 180	12%	0.21	52 / 430
spleen	99%	22.59	238 / 241	0%	0	0 / 0
thymus	96%	16.01	630 / 653	1%	0.02	9 / 605
lung	93%	16.45	538 / 578	5%	0.17	56 / 1155
bladder	86%	11.48	18 / 21	11%	0.31	57 / 504
liver	89%	10.54	201 / 226	6%	0.10	26 / 406
heart	94%	16.28	812 / 861	0%	0	0 / 0
prostate	92%	12.51	225 / 245	1%	0.02	7 / 502
adrenal gland	93%	11.07	239 / 258	0%	0	0 / 230
esophagus	81%	8.82	1169 / 1445	11%	0.24	20 / 183
uterus	85%	9.19	144 / 170	5%	0.07	25 / 459
breast	80%	8.45	366 / 459	2%	0.03	19 / 1118
blood vessel	77%	8.84	1022 / 1335	0%	0	0 / 0
skin	62%	4.93	1119 / 1809	13%	0.23	62 / 472
adipose	75%	8.66	900 / 1204	0%	0	0 / 0
brain	66%	5.67	1756 / 2642	0%	0.00	2 / 705
pancreas	49%	3.02	162 / 328	11%	0.99	20 / 178
muscle	36%	1.94	293 / 803	0%	0	0 / 0
peripheral blood	6%	0.33	58 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
eye	0%	0	0 / 0	0%	0	0 / 80
gingiva	0%	0	0 / 0	0%	0	0 / 0
lymph node	0%	0	0 / 0	0%	0	0 / 29
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
tonsil	0%	0	0 / 0	0%	0	0 / 45
ureter	0%	0	0 / 0	0%	0	0 / 1