Insufficient scRNA-seq data for expression of REG3G at single-cell level.
Insufficient scRNA-seq data for expression of REG3G at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
pancreas | 100% | 76040.17 | 328 / 328 | 61% | 174.35 | 108 / 178 |
adrenal gland | 95% | 1580.45 | 245 / 258 | 20% | 4.97 | 45 / 230 |
kidney | 47% | 203.30 | 42 / 89 | 29% | 6.79 | 262 / 901 |
intestine | 15% | 234.98 | 149 / 966 | 9% | 13.86 | 50 / 527 |
skin | 1% | 0.55 | 10 / 1809 | 23% | 5.06 | 107 / 472 |
ovary | 3% | 2.47 | 5 / 180 | 13% | 0.49 | 54 / 430 |
stomach | 2% | 9.35 | 8 / 359 | 12% | 22.79 | 33 / 286 |
esophagus | 2% | 4.08 | 23 / 1445 | 9% | 0.88 | 16 / 183 |
liver | 2% | 1.94 | 5 / 226 | 3% | 16.56 | 14 / 406 |
uterus | 2% | 2.73 | 4 / 170 | 3% | 0.20 | 15 / 459 |
adipose | 4% | 27.85 | 49 / 1204 | 0% | 0 | 0 / 0 |
lung | 1% | 0.76 | 5 / 578 | 2% | 0.21 | 25 / 1155 |
breast | 3% | 5.05 | 12 / 459 | 0% | 0.00 | 2 / 1118 |
spleen | 2% | 2.73 | 6 / 241 | 0% | 0 | 0 / 0 |
bladder | 0% | 0 | 0 / 21 | 2% | 0.86 | 11 / 504 |
thymus | 2% | 3.38 | 13 / 653 | 0% | 0 | 0 / 605 |
heart | 1% | 4.85 | 12 / 861 | 0% | 0 | 0 / 0 |
blood vessel | 1% | 4.77 | 17 / 1335 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 1% | 0.03 | 1 / 80 |
prostate | 1% | 1.18 | 2 / 245 | 0% | 0.00 | 1 / 502 |
brain | 0% | 4.40 | 13 / 2642 | 0% | 0.00 | 1 / 705 |
peripheral blood | 0% | 0.47 | 4 / 929 | 0% | 0 | 0 / 0 |
muscle | 0% | 1.43 | 2 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 45 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0002755 | Biological process | MyD88-dependent toll-like receptor signaling pathway |
GO_0045617 | Biological process | negative regulation of keratinocyte differentiation |
GO_0008284 | Biological process | positive regulation of cell population proliferation |
GO_0061844 | Biological process | antimicrobial humoral immune response mediated by antimicrobial peptide |
GO_0006953 | Biological process | acute-phase response |
GO_0050830 | Biological process | defense response to Gram-positive bacterium |
GO_0010838 | Biological process | positive regulation of keratinocyte proliferation |
GO_0043434 | Biological process | response to peptide hormone |
GO_0090303 | Biological process | positive regulation of wound healing |
GO_0005615 | Cellular component | extracellular space |
GO_0005576 | Cellular component | extracellular region |
GO_0005737 | Cellular component | cytoplasm |
GO_0070492 | Molecular function | oligosaccharide binding |
GO_0038023 | Molecular function | signaling receptor activity |
GO_0042834 | Molecular function | peptidoglycan binding |
GO_0046872 | Molecular function | metal ion binding |
Gene name | REG3G |
Protein name | Regenerating islet-derived protein 3-gamma (REG-3-gamma) (Pancreatitis-associated protein 1B) (PAP-1B) (Pancreatitis-associated protein IB) (PAP IB) (Regenerating islet-derived protein III-gamma) (REG III) (Reg III-gamma) [Cleaved into: Regenerating islet-derived protein 3-gamma 16.5 kDa form; Regenerating islet-derived protein 3-gamma 15 kDa form] |
Synonyms | PAP1B UNQ429/PRO162 |
Description | FUNCTION: Bactericidal C-type lectin which acts exclusively against Gram-positive bacteria and mediates bacterial killing by binding to surface-exposed carbohydrate moieties of peptidoglycan. Restricts bacterial colonization of the intestinal epithelial surface and consequently limits activation of adaptive immune responses by the microbiota. .; FUNCTION: Acts as a hormone in response to different stimuli like anti-inflammatory signals, such as IL17A, or gut microbiome. Is secreted by different cell types to activate its receptor EXTL3 and induce cell specific signaling pathways. Induced by IL17A in keratinocytes, regulates keratinocyte proliferation and differentiation after skin injury. In parallel, inhibits skin inflammation through the inhibition of inflammatory cytokines such as IL6 and TNF. Induced by IL22 in lung epithelial cells, inhibits cytokine production and regulates allergic airway inflammation. Induced in small intestine by inulin-enriched diet and Lactobacillus gasseri enriched microbiome, plays a role in the improvement of gut barrier function, the regulation of energy balance and glucose levels. Modulates microbiota composition in duodenal contents. Produced by nociceptor in response to endotoxins, prevents endotoxic death by targeting kynurenine pathway in microglia. .; FUNCTION: [Regenerating islet-derived protein 3-gamma 16.5 kDa form]: Has bacteriostatic activity. .; FUNCTION: [Regenerating islet-derived protein 3-gamma 15 kDa form]: Has bactericidal activity against L.monocytogenes and methicillin-resistant S.aureus. . |
Accessions | ENST00000409471.1 [Q6UW15-2] Q6UW15 ENST00000393897.6 [Q6UW15-1] ENST00000272324.10 [Q6UW15-1] |