Insufficient scRNA-seq data for expression of RBM46 at single-cell level.
Insufficient scRNA-seq data for expression of RBM46 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
thymus | 92% | 31.62 | 598 / 653 | 11% | 0.86 | 66 / 605 |
liver | 91% | 11.94 | 205 / 226 | 3% | 0.14 | 14 / 406 |
prostate | 71% | 10.14 | 173 / 245 | 1% | 0.03 | 3 / 502 |
intestine | 66% | 10.19 | 635 / 966 | 0% | 0.03 | 1 / 527 |
breast | 62% | 10.05 | 285 / 459 | 2% | 0.07 | 17 / 1118 |
kidney | 47% | 4.09 | 42 / 89 | 6% | 0.10 | 53 / 901 |
adipose | 48% | 6.82 | 582 / 1204 | 0% | 0 | 0 / 0 |
pancreas | 43% | 5.34 | 140 / 328 | 2% | 0.06 | 4 / 178 |
brain | 38% | 3.81 | 1014 / 2642 | 4% | 0.06 | 27 / 705 |
stomach | 36% | 3.31 | 129 / 359 | 2% | 0.20 | 6 / 286 |
esophagus | 30% | 2.52 | 427 / 1445 | 6% | 0.30 | 11 / 183 |
bladder | 29% | 2.38 | 6 / 21 | 1% | 0.03 | 6 / 504 |
skin | 28% | 3.68 | 498 / 1809 | 2% | 0.12 | 10 / 472 |
ovary | 23% | 3.51 | 41 / 180 | 3% | 0.07 | 11 / 430 |
heart | 22% | 2.21 | 192 / 861 | 0% | 0 | 0 / 0 |
lung | 16% | 1.92 | 92 / 578 | 3% | 0.37 | 40 / 1155 |
uterus | 17% | 2.34 | 29 / 170 | 2% | 0.10 | 7 / 459 |
adrenal gland | 15% | 1.35 | 38 / 258 | 1% | 0.01 | 2 / 230 |
spleen | 12% | 2.42 | 28 / 241 | 0% | 0 | 0 / 0 |
blood vessel | 11% | 1.27 | 148 / 1335 | 0% | 0 | 0 / 0 |
muscle | 4% | 0.59 | 31 / 803 | 0% | 0 | 0 / 0 |
peripheral blood | 3% | 0.58 | 26 / 929 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 2% | 0.06 | 1 / 45 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 80 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0007140 | Biological process | male meiotic nuclear division |
GO_0001829 | Biological process | trophectodermal cell differentiation |
GO_0051728 | Biological process | cell cycle switching, mitotic to meiotic cell cycle |
GO_0007283 | Biological process | spermatogenesis |
GO_0048255 | Biological process | mRNA stabilization |
GO_0007143 | Biological process | female meiotic nuclear division |
GO_0048477 | Biological process | oogenesis |
GO_0048515 | Biological process | spermatid differentiation |
GO_0005737 | Cellular component | cytoplasm |
GO_0005634 | Cellular component | nucleus |
GO_0005515 | Molecular function | protein binding |
GO_0003729 | Molecular function | mRNA binding |
Gene name | RBM46 |
Protein name | Probable RNA-binding protein 46 (Cancer/testis antigen 68) (CT68) (RNA-binding motif protein 46) RNA binding motif protein 46 |
Synonyms | |
Description | FUNCTION: Essential for male and female fertility, playing a crucial role in regulating germ cell development by ensuring the proper progression of meiosis prophase I (By similarity). Regulates mitotic-to-meiotic transition in spermatogenesis by forming a complex with MEIOC and YTHDC2 which recognizes and down-regulates mitotic transcripts for a successful meiotic entry (By similarity). Required for normal synaptonemal complex formation during meiosis, binding meiotic cohesin subunit mRNAs containing GCCUAU/GUUCGA motifs in their 3'UTRs regions and positively regulating their translation (By similarity). Required for spermatogonial differentiation in both developing and adult testis (By similarity). . |
Accessions | ENST00000510397.5 [Q8TBY0-2] ENST00000512640.1 D6RF41 Q8TBY0 ENST00000281722.8 [Q8TBY0-1] ENST00000514866.5 [Q8TBY0-3] |