Name | Number of supported studies | Average coverage | |
---|---|---|---|
glutamatergic neuron | 10 studies | 36% ± 22% | |
oligodendrocyte precursor cell | 8 studies | 25% ± 8% | |
endothelial cell | 7 studies | 24% ± 6% | |
microglial cell | 7 studies | 24% ± 7% | |
macrophage | 6 studies | 21% ± 4% | |
neuron | 5 studies | 24% ± 7% | |
oligodendrocyte | 5 studies | 19% ± 3% | |
GABAergic neuron | 4 studies | 34% ± 12% | |
pericyte | 3 studies | 21% ± 4% | |
myeloid cell | 3 studies | 29% ± 10% | |
dendritic cell | 3 studies | 21% ± 4% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 7 studies | 33% ± 16% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 5791.50 | 2642 / 2642 | 100% | 141.67 | 705 / 705 |
esophagus | 100% | 2239.35 | 1444 / 1445 | 100% | 29.69 | 183 / 183 |
lung | 100% | 2860.26 | 577 / 578 | 99% | 27.64 | 1147 / 1155 |
breast | 100% | 2198.61 | 458 / 459 | 99% | 31.27 | 1106 / 1118 |
intestine | 100% | 1902.19 | 966 / 966 | 99% | 30.49 | 520 / 527 |
thymus | 100% | 1650.29 | 650 / 653 | 98% | 23.62 | 595 / 605 |
bladder | 100% | 1723.57 | 21 / 21 | 97% | 26.29 | 487 / 504 |
uterus | 100% | 1882.78 | 170 / 170 | 96% | 24.48 | 442 / 459 |
ovary | 99% | 1280.62 | 179 / 180 | 94% | 14.78 | 405 / 430 |
kidney | 100% | 1645.89 | 89 / 89 | 93% | 30.31 | 842 / 901 |
prostate | 98% | 1331.88 | 241 / 245 | 94% | 15.52 | 474 / 502 |
adrenal gland | 100% | 1591.68 | 257 / 258 | 93% | 19.54 | 213 / 230 |
skin | 96% | 1575.79 | 1742 / 1809 | 93% | 34.10 | 441 / 472 |
stomach | 84% | 986.72 | 301 / 359 | 99% | 29.84 | 284 / 286 |
liver | 72% | 626.25 | 162 / 226 | 90% | 19.11 | 364 / 406 |
pancreas | 52% | 396.24 | 170 / 328 | 98% | 20.69 | 175 / 178 |
adipose | 100% | 2785.22 | 1204 / 1204 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 25.15 | 29 / 29 |
spleen | 100% | 1967.51 | 241 / 241 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 3383.30 | 1332 / 1335 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 98% | 24.15 | 44 / 45 |
heart | 96% | 1328.98 | 827 / 861 | 0% | 0 | 0 / 0 |
muscle | 96% | 1248.68 | 770 / 803 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 48% | 5.32 | 38 / 80 |
peripheral blood | 38% | 1173.37 | 354 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0046328 | Biological process | regulation of JNK cascade |
GO_0045198 | Biological process | establishment of epithelial cell apical/basal polarity |
GO_0071466 | Biological process | cellular response to xenobiotic stimulus |
GO_0072659 | Biological process | protein localization to plasma membrane |
GO_0048814 | Biological process | regulation of dendrite morphogenesis |
GO_0045184 | Biological process | establishment of protein localization |
GO_0099072 | Biological process | regulation of postsynaptic membrane neurotransmitter receptor levels |
GO_0001934 | Biological process | positive regulation of protein phosphorylation |
GO_0030033 | Biological process | microvillus assembly |
GO_0032486 | Biological process | Rap protein signal transduction |
GO_0030036 | Biological process | actin cytoskeleton organization |
GO_0051963 | Biological process | regulation of synapse assembly |
GO_0031954 | Biological process | positive regulation of protein autophosphorylation |
GO_0030336 | Biological process | negative regulation of cell migration |
GO_0008104 | Biological process | protein localization |
GO_0030496 | Cellular component | midbody |
GO_0098685 | Cellular component | Schaffer collateral - CA1 synapse |
GO_0005886 | Cellular component | plasma membrane |
GO_0055037 | Cellular component | recycling endosome |
GO_0097060 | Cellular component | synaptic membrane |
GO_0055038 | Cellular component | recycling endosome membrane |
GO_0005829 | Cellular component | cytosol |
GO_0019003 | Molecular function | GDP binding |
GO_0003925 | Molecular function | G protein activity |
GO_0000287 | Molecular function | magnesium ion binding |
GO_0005525 | Molecular function | GTP binding |
GO_0005515 | Molecular function | protein binding |
GO_0003924 | Molecular function | GTPase activity |
Gene name | RAP2A |
Protein name | Ras-related protein Rap-2a (EC 3.6.5.2) (RbBP-30) RAP2A, member of RAS oncogene family |
Synonyms | |
Description | FUNCTION: Small GTP-binding protein which cycles between a GDP-bound inactive and a GTP-bound active form. In its active form interacts with and regulates several effectors including MAP4K4, MINK1 and TNIK. Part of a signaling complex composed of NEDD4, RAP2A and TNIK which regulates neuronal dendrite extension and arborization during development. More generally, it is part of several signaling cascades and may regulate cytoskeletal rearrangements, cell migration, cell adhesion and cell spreading. . |
Accessions | ENST00000476869.1 ENST00000245304.5 P10114 F6U784 |