Name | Number of supported studies | Average coverage | |
---|---|---|---|
microglial cell | 4 studies | 24% ± 6% | |
epithelial cell | 4 studies | 26% ± 4% | |
endothelial cell | 3 studies | 30% ± 9% | |
interneuron | 3 studies | 28% ± 16% | |
GABAergic neuron | 3 studies | 29% ± 10% | |
glutamatergic neuron | 3 studies | 34% ± 13% | |
dendritic cell | 3 studies | 21% ± 4% | |
astrocyte | 3 studies | 22% ± 3% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 5 studies | 25% ± 5% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 4777.20 | 1445 / 1445 | 100% | 25.46 | 183 / 183 |
intestine | 100% | 4885.62 | 966 / 966 | 100% | 28.46 | 527 / 527 |
pancreas | 100% | 2130.06 | 328 / 328 | 100% | 27.26 | 178 / 178 |
prostate | 100% | 5128.33 | 245 / 245 | 100% | 34.53 | 502 / 502 |
stomach | 100% | 3618.30 | 359 / 359 | 100% | 27.44 | 286 / 286 |
thymus | 100% | 4244.41 | 653 / 653 | 100% | 38.41 | 605 / 605 |
uterus | 100% | 4892.95 | 170 / 170 | 100% | 32.20 | 459 / 459 |
brain | 100% | 3660.42 | 2641 / 2642 | 100% | 41.18 | 705 / 705 |
skin | 100% | 4015.48 | 1808 / 1809 | 100% | 35.76 | 472 / 472 |
lung | 100% | 3737.76 | 578 / 578 | 100% | 26.29 | 1154 / 1155 |
bladder | 100% | 5002.24 | 21 / 21 | 100% | 30.43 | 503 / 504 |
adrenal gland | 100% | 5053.50 | 258 / 258 | 100% | 34.47 | 229 / 230 |
kidney | 100% | 3031.21 | 89 / 89 | 100% | 21.82 | 897 / 901 |
ovary | 100% | 3978.45 | 180 / 180 | 100% | 23.67 | 428 / 430 |
breast | 100% | 3750.10 | 459 / 459 | 99% | 30.80 | 1112 / 1118 |
liver | 100% | 1903.21 | 226 / 226 | 99% | 16.92 | 403 / 406 |
adipose | 100% | 3507.66 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 4132.85 | 1335 / 1335 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 39.60 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 43.56 | 29 / 29 |
muscle | 100% | 2495.85 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 4818.00 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 34.09 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 16.38 | 1 / 1 |
heart | 99% | 2894.97 | 856 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 98% | 2928.95 | 908 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0006611 | Biological process | protein export from nucleus |
GO_0005737 | Cellular component | cytoplasm |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005643 | Cellular component | nuclear pore |
GO_0005634 | Cellular component | nucleus |
GO_0070412 | Molecular function | R-SMAD binding |
GO_0005515 | Molecular function | protein binding |
GO_0005096 | Molecular function | GTPase activator activity |
Gene name | RANBP3 |
Protein name | RAN binding protein 3 Ran-binding protein 3 (RanBP3) RAN binding protein 3 (cDNA FLJ58549, highly similar to Ran-binding protein 3) |
Synonyms | |
Description | FUNCTION: Acts as a cofactor for XPO1/CRM1-mediated nuclear export, perhaps as export complex scaffolding protein. Bound to XPO1/CRM1, stabilizes the XPO1/CRM1-cargo interaction. In the absence of Ran-bound GTP prevents binding of XPO1/CRM1 to the nuclear pore complex. Binds to CHC1/RCC1 and increases the guanine nucleotide exchange activity of CHC1/RCC1. Recruits XPO1/CRM1 to CHC1/RCC1 in a Ran-dependent manner. Negative regulator of TGF-beta signaling through interaction with the R-SMAD proteins, SMAD2 and SMAD3, and mediating their nuclear export. . |
Accessions | ENST00000340578.10 [Q9H6Z4-1] K7EIJ4 ENST00000592133.5 K7EMT3 ENST00000588010.5 ENST00000592771.5 K7ENJ2 K7EQB8 ENST00000591092.5 ENST00000585339.5 ENST00000587263.5 K7ERD4 ENST00000587479.2 Q9H6Z4 K7EMH9 ENST00000590623.5 K7ENB9 ENST00000034275.12 [Q9H6Z4-3] K7EPW1 B7Z7F3 ENST00000592621.5 ENST00000591333.5 ENST00000439268.6 [Q9H6Z4-2] K7EID7 ENST00000587463.5 ENST00000591736.5 K7ESQ0 K7EN31 K7EJ17 ENST00000589353.5 |