RAI2 report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
endothelial cell	3 studies	21% ± 4%	Explore
GABAergic neuron	3 studies	26% ± 7%	Explore
glutamatergic neuron	3 studies	29% ± 9%	Explore

II. Expression across tissues

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
ovary	100%	5220.21	180 / 180	99%	80.50	427 / 430
prostate	100%	3672.50	245 / 245	98%	37.79	493 / 502
kidney	98%	1416.01	87 / 89	95%	41.21	853 / 901
thymus	100%	2569.15	652 / 653	91%	46.81	551 / 605
adrenal gland	98%	1509.68	254 / 258	85%	36.65	196 / 230
breast	100%	5312.08	459 / 459	79%	37.48	880 / 1118
pancreas	81%	699.76	267 / 328	89%	27.89	159 / 178
lung	100%	3252.76	577 / 578	63%	11.53	730 / 1155
stomach	100%	2578.17	359 / 359	63%	15.66	179 / 286
esophagus	95%	2766.44	1374 / 1445	51%	9.67	94 / 183
intestine	99%	2861.74	952 / 966	48%	9.54	252 / 527
brain	66%	535.17	1754 / 2642	75%	11.89	530 / 705
uterus	100%	7103.53	170 / 170	36%	11.68	167 / 459
bladder	100%	4313.62	21 / 21	34%	5.35	172 / 504
adipose	100%	4798.96	1204 / 1204	0%	0	0 / 0
blood vessel	100%	3230.81	1335 / 1335	0%	0	0 / 0
heart	99%	2115.96	855 / 861	0%	0	0 / 0
skin	69%	1382.34	1256 / 1809	11%	1.46	51 / 472
muscle	67%	645.60	534 / 803	0%	0	0 / 0
tonsil	0%	0	0 / 0	42%	5.20	19 / 45
spleen	35%	236.12	84 / 241	0%	0	0 / 0
lymph node	0%	0	0 / 0	28%	5.35	8 / 29
liver	4%	31.03	10 / 226	19%	4.44	79 / 406
eye	0%	0	0 / 0	10%	1.34	8 / 80
peripheral blood	0%	2.41	3 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
ureter	0%	0	0 / 0	0%	0	0 / 1