Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 10 studies | 22% ± 6% | |
epithelial cell | 10 studies | 33% ± 12% | |
ciliated cell | 8 studies | 25% ± 6% | |
glutamatergic neuron | 6 studies | 35% ± 22% | |
basal cell | 5 studies | 22% ± 7% | |
GABAergic neuron | 5 studies | 29% ± 16% | |
B cell | 4 studies | 18% ± 3% | |
astrocyte | 4 studies | 25% ± 6% | |
goblet cell | 4 studies | 25% ± 8% | |
classical monocyte | 3 studies | 32% ± 12% | |
hematopoietic precursor cell | 3 studies | 21% ± 8% | |
plasmablast | 3 studies | 33% ± 12% | |
squamous epithelial cell | 3 studies | 37% ± 22% | |
club cell | 3 studies | 17% ± 2% | |
fibroblast | 3 studies | 16% ± 1% | |
retinal ganglion cell | 3 studies | 31% ± 19% | |
type I pneumocyte | 3 studies | 21% ± 4% | |
abnormal cell | 3 studies | 24% ± 8% | |
enteroendocrine cell | 3 studies | 29% ± 10% | |
pericyte | 3 studies | 17% ± 0% | |
granule cell | 3 studies | 20% ± 5% | |
plasmacytoid dendritic cell | 3 studies | 16% ± 1% | |
oligodendrocyte | 3 studies | 20% ± 4% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 7229.08 | 1445 / 1445 | 100% | 32.72 | 183 / 183 |
ovary | 100% | 5761.93 | 180 / 180 | 100% | 25.29 | 430 / 430 |
pancreas | 100% | 7498.95 | 328 / 328 | 100% | 34.73 | 178 / 178 |
thymus | 100% | 6910.66 | 653 / 653 | 100% | 35.08 | 605 / 605 |
uterus | 100% | 5838.43 | 170 / 170 | 100% | 40.04 | 459 / 459 |
brain | 100% | 12166.92 | 2641 / 2642 | 100% | 39.05 | 704 / 705 |
intestine | 100% | 8025.75 | 966 / 966 | 100% | 50.20 | 525 / 527 |
prostate | 100% | 10483.43 | 245 / 245 | 99% | 53.94 | 499 / 502 |
kidney | 100% | 6717.98 | 89 / 89 | 99% | 24.54 | 895 / 901 |
skin | 100% | 6409.33 | 1808 / 1809 | 99% | 39.29 | 469 / 472 |
stomach | 100% | 6511.20 | 359 / 359 | 99% | 39.03 | 284 / 286 |
bladder | 100% | 6424.62 | 21 / 21 | 99% | 39.44 | 500 / 504 |
breast | 100% | 5456.83 | 459 / 459 | 99% | 32.47 | 1106 / 1118 |
adrenal gland | 100% | 5962.65 | 258 / 258 | 99% | 30.05 | 227 / 230 |
lung | 100% | 6425.77 | 576 / 578 | 99% | 28.75 | 1142 / 1155 |
liver | 81% | 1639.76 | 184 / 226 | 61% | 8.74 | 248 / 406 |
adipose | 100% | 5372.77 | 1204 / 1204 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 65.13 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 50.02 | 29 / 29 |
muscle | 100% | 11560.10 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 7428.67 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 45.21 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 39.43 | 1 / 1 |
blood vessel | 100% | 5542.72 | 1333 / 1335 | 0% | 0 | 0 / 0 |
heart | 99% | 6292.83 | 854 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 90% | 3955.30 | 835 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0005813 | Cellular component | centrosome |
GO_0005829 | Cellular component | cytosol |
GO_0005737 | Cellular component | cytoplasm |
GO_0005634 | Cellular component | nucleus |
GO_0005525 | Molecular function | GTP binding |
GO_0005515 | Molecular function | protein binding |
Gene name | RABL6 |
Protein name | Rab-like protein 6 (GTP-binding protein Parf) (Partner of ARF) (Rab-like protein 1) (RBEL1) RAB, member RAS oncogene family like 6 Chromosome 9 open reading frame 86, isoform CRA_d (RAB, member RAS oncogene family like 6) |
Synonyms | PARF hCG_2021977 C9orf86 |
Description | FUNCTION: May enhance cellular proliferation. May reduce growth inhibitory activity of CDKN2A. . |
Accessions | ENST00000371663.10 [Q3YEC7-2] H0Y7H6 ENST00000371671.9 [Q3YEC7-6] ENST00000357466.6 [Q3YEC7-3] ENST00000484471.6 ENST00000629216.2 F2Z2T0 ENST00000436380.5 ENST00000311502.12 [Q3YEC7-1] G3V154 ENST00000464941.5 Q3YEC7 |