Name | Number of supported studies | Average coverage | |
---|---|---|---|
ciliated cell | 19 studies | 50% ± 19% | |
epithelial cell | 3 studies | 30% ± 5% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
skin | 100% | 1624.45 | 1808 / 1809 | 100% | 8.25 | 470 / 472 |
esophagus | 100% | 1508.11 | 1445 / 1445 | 99% | 7.51 | 182 / 183 |
prostate | 100% | 2270.11 | 245 / 245 | 99% | 7.96 | 499 / 502 |
breast | 100% | 1970.36 | 459 / 459 | 99% | 11.71 | 1111 / 1118 |
brain | 100% | 2304.28 | 2629 / 2642 | 100% | 12.07 | 704 / 705 |
thymus | 100% | 3307.97 | 653 / 653 | 99% | 10.90 | 600 / 605 |
lung | 100% | 2227.34 | 578 / 578 | 99% | 9.51 | 1145 / 1155 |
ovary | 100% | 2692.96 | 180 / 180 | 99% | 9.57 | 426 / 430 |
uterus | 100% | 2869.59 | 170 / 170 | 99% | 8.52 | 454 / 459 |
kidney | 100% | 1932.71 | 89 / 89 | 99% | 9.24 | 891 / 901 |
intestine | 100% | 1868.37 | 966 / 966 | 99% | 6.61 | 520 / 527 |
bladder | 100% | 1946.48 | 21 / 21 | 99% | 7.36 | 497 / 504 |
stomach | 100% | 1221.26 | 358 / 359 | 99% | 6.44 | 282 / 286 |
pancreas | 99% | 1147.01 | 326 / 328 | 98% | 7.60 | 175 / 178 |
adrenal gland | 100% | 1301.48 | 257 / 258 | 88% | 3.97 | 203 / 230 |
liver | 98% | 820.80 | 222 / 226 | 78% | 3.66 | 316 / 406 |
adipose | 100% | 1518.47 | 1204 / 1204 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 6.30 | 29 / 29 |
spleen | 100% | 2075.51 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 7.42 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 3.87 | 1 / 1 |
blood vessel | 100% | 1399.10 | 1330 / 1335 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 98% | 5.16 | 78 / 80 |
heart | 90% | 669.71 | 776 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 77% | 687.77 | 716 / 929 | 0% | 0 | 0 / 0 |
muscle | 69% | 412.14 | 554 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0060271 | Biological process | cilium assembly |
GO_0006886 | Biological process | intracellular protein transport |
GO_0042073 | Biological process | intraciliary transport |
GO_0005814 | Cellular component | centriole |
GO_0036064 | Cellular component | ciliary basal body |
GO_0000242 | Cellular component | pericentriolar material |
GO_0012505 | Cellular component | endomembrane system |
GO_0005737 | Cellular component | cytoplasm |
GO_0005525 | Molecular function | GTP binding |
GO_0005515 | Molecular function | protein binding |
GO_0003924 | Molecular function | GTPase activity |
Gene name | RABL2B |
Protein name | RAB, member of RAS oncogene family like 2B Rab-like protein 2B RABL2A protein (RABL2B protein) (cDNA FLJ78724, highly similar to Homo sapiens RAB, member of RAS oncogene family-like 2B (RABL2B), transcript variant 1, mRNA) |
Synonyms | RABL2A |
Description | FUNCTION: Small GTPase required for ciliation. Activated in a guanine nucleotide exchange factor (GEF)-independent manner via its intrinsic GDP for GTP nucleotide exchange ability . Involved in ciliary assembly by binding the intraflagellar transport (IFT) complex B from the large pool pre-docked at the base of the cilium and thus triggers its entry into the cilia . . |
Accessions | ENST00000395595.8 [Q9UNT1-2] ENST00000413505.1 Q9UNT1 ENST00000435118.5 [Q9UNT1-1] A0A8I5KX29 F2Z3J7 ENST00000395590.5 ENST00000395598.7 [Q9UNT1-1] C9JFZ0 ENST00000468451.1 A0A8I5KRY9 F2Z2T3 ENST00000436958.5 ENST00000691320.1 [Q9UNT1-2] ENST00000395591.5 Q6IC14 F2Z3A9 A8MXF6 ENST00000425098.5 ENST00000685352.1 ENST00000395593.7 [Q9UNT1-3] ENST00000690024.1 ENST00000354869.8 [Q9UNT1-2] |