Name | Number of supported studies | Average coverage | |
---|---|---|---|
glutamatergic neuron | 4 studies | 37% ± 18% | |
epithelial cell | 3 studies | 24% ± 4% | |
GABAergic neuron | 3 studies | 36% ± 13% | |
astrocyte | 3 studies | 19% ± 3% | |
abnormal cell | 3 studies | 22% ± 5% | |
oligodendrocyte precursor cell | 3 studies | 19% ± 1% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 4 studies | 30% ± 12% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 1276.09 | 2642 / 2642 | 100% | 35.97 | 705 / 705 |
esophagus | 100% | 1018.90 | 1445 / 1445 | 100% | 18.40 | 183 / 183 |
ovary | 100% | 869.82 | 180 / 180 | 100% | 19.95 | 430 / 430 |
prostate | 100% | 1031.65 | 245 / 245 | 100% | 20.00 | 502 / 502 |
skin | 100% | 1261.87 | 1809 / 1809 | 100% | 21.98 | 472 / 472 |
breast | 100% | 1178.56 | 459 / 459 | 100% | 28.99 | 1116 / 1118 |
intestine | 100% | 1046.42 | 966 / 966 | 100% | 29.75 | 526 / 527 |
pancreas | 100% | 546.12 | 327 / 328 | 100% | 17.44 | 178 / 178 |
stomach | 100% | 755.57 | 359 / 359 | 100% | 24.88 | 285 / 286 |
uterus | 100% | 1122.55 | 170 / 170 | 100% | 23.52 | 457 / 459 |
kidney | 100% | 854.71 | 89 / 89 | 100% | 14.28 | 897 / 901 |
thymus | 100% | 891.04 | 652 / 653 | 100% | 16.84 | 603 / 605 |
liver | 100% | 1986.75 | 226 / 226 | 100% | 33.40 | 404 / 406 |
lung | 99% | 896.31 | 575 / 578 | 100% | 21.81 | 1155 / 1155 |
bladder | 100% | 1208.10 | 21 / 21 | 99% | 24.17 | 501 / 504 |
adrenal gland | 100% | 985.50 | 258 / 258 | 99% | 21.89 | 227 / 230 |
adipose | 100% | 1168.26 | 1204 / 1204 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 29.74 | 29 / 29 |
spleen | 100% | 887.59 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 20.67 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 17.77 | 1 / 1 |
blood vessel | 100% | 1120.79 | 1334 / 1335 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 99% | 18.21 | 79 / 80 |
muscle | 99% | 584.65 | 792 / 803 | 0% | 0 | 0 / 0 |
heart | 98% | 635.41 | 846 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 89% | 703.37 | 825 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0006904 | Biological process | vesicle docking involved in exocytosis |
GO_0006898 | Biological process | receptor-mediated endocytosis |
GO_0032588 | Cellular component | trans-Golgi network membrane |
GO_0043231 | Cellular component | intracellular membrane-bounded organelle |
GO_0010008 | Cellular component | endosome membrane |
GO_0005768 | Cellular component | endosome |
GO_0005829 | Cellular component | cytosol |
GO_0030133 | Cellular component | transport vesicle |
GO_0005515 | Molecular function | protein binding |
Gene name | RABEPK |
Protein name | Rab9 effector protein with kelch motifs (40 kDa Rab9 effector protein) (p40) Rab9 effector protein with kelch motifs Rab9 effector protein with kelch motifs isoform 3 Rab9 effector protein with kelch motifs isoform 2 |
Synonyms | hCG_29658 RAB9P40 |
Description | FUNCTION: Rab9 effector required for endosome to trans-Golgi network (TGN) transport. . FUNCTION: Rab9 effector required for endosome to trans-Golgi network (TGN) transport. . FUNCTION: Rab9 effector required for endosome to trans-Golgi network (TGN) transport. . FUNCTION: Rab9 effector required for endosome to trans-Golgi network (TGN) transport. . FUNCTION: Rab9 effector required for endosome to trans-Golgi network (TGN) transport. . FUNCTION: Rab9 effector required for endosome to trans-Golgi network (TGN) transport. . |
Accessions | Q7Z6M1 ENST00000416065.1 A0A0S2Z553 ENST00000259460.12 [Q7Z6M1-2] A0A0S2Z4Z5 ENST00000373544.5 ENST00000628863.2 Q5T1S5 ENST00000394125.8 [Q7Z6M1-1] A0A024R8A0 A0A0S2Z4Z1 A0A0S2Z506 ENST00000373538.8 [Q7Z6M1-1] Q5T1S4 |