Name | Number of supported studies | Average coverage | |
---|---|---|---|
oligodendrocyte precursor cell | 4 studies | 25% ± 7% | |
GABAergic neuron | 3 studies | 29% ± 10% | |
glutamatergic neuron | 3 studies | 44% ± 13% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 3 studies | 28% ± 11% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 98% | 1435.23 | 2580 / 2642 | 100% | 13.33 | 703 / 705 |
prostate | 96% | 739.36 | 236 / 245 | 89% | 3.85 | 449 / 502 |
thymus | 56% | 150.96 | 367 / 653 | 91% | 2.77 | 552 / 605 |
uterus | 99% | 954.22 | 168 / 170 | 45% | 3.37 | 205 / 459 |
adrenal gland | 47% | 128.16 | 122 / 258 | 94% | 10.27 | 216 / 230 |
bladder | 95% | 1247.81 | 20 / 21 | 45% | 1.38 | 228 / 504 |
ovary | 100% | 1063.11 | 180 / 180 | 30% | 0.74 | 129 / 430 |
breast | 45% | 123.83 | 208 / 459 | 74% | 2.22 | 828 / 1118 |
esophagus | 79% | 916.00 | 1136 / 1445 | 40% | 1.12 | 74 / 183 |
intestine | 79% | 725.08 | 767 / 966 | 31% | 0.69 | 166 / 527 |
blood vessel | 100% | 1102.49 | 1330 / 1335 | 0% | 0 | 0 / 0 |
stomach | 52% | 320.10 | 188 / 359 | 44% | 1.29 | 125 / 286 |
muscle | 94% | 544.83 | 758 / 803 | 0% | 0 | 0 / 0 |
heart | 94% | 1236.26 | 808 / 861 | 0% | 0 | 0 / 0 |
skin | 7% | 19.91 | 126 / 1809 | 80% | 3.87 | 378 / 472 |
pancreas | 10% | 22.09 | 33 / 328 | 71% | 2.02 | 126 / 178 |
kidney | 4% | 10.80 | 4 / 89 | 71% | 1.98 | 639 / 901 |
lung | 26% | 63.74 | 150 / 578 | 37% | 0.97 | 432 / 1155 |
adipose | 53% | 221.90 | 635 / 1204 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 52% | 0.98 | 15 / 29 |
eye | 0% | 0 | 0 / 0 | 38% | 0.66 | 30 / 80 |
tonsil | 0% | 0 | 0 / 0 | 36% | 1.36 | 16 / 45 |
liver | 0% | 0 | 0 / 226 | 6% | 0.10 | 24 / 406 |
spleen | 4% | 9.26 | 10 / 241 | 0% | 0 | 0 / 0 |
peripheral blood | 1% | 1.89 | 9 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0042147 | Biological process | retrograde transport, endosome to Golgi |
GO_0015031 | Biological process | protein transport |
GO_0032482 | Biological process | Rab protein signal transduction |
GO_0005764 | Cellular component | lysosome |
GO_0030667 | Cellular component | secretory granule membrane |
GO_0005829 | Cellular component | cytosol |
GO_0045335 | Cellular component | phagocytic vesicle |
GO_0005886 | Cellular component | plasma membrane |
GO_0005770 | Cellular component | late endosome |
GO_0030670 | Cellular component | phagocytic vesicle membrane |
GO_0019003 | Molecular function | GDP binding |
GO_0005525 | Molecular function | GTP binding |
GO_0042802 | Molecular function | identical protein binding |
GO_0005515 | Molecular function | protein binding |
GO_0003924 | Molecular function | GTPase activity |
Gene name | RAB9B |
Protein name | Ras-related protein Rab-9B (Rab-9-like protein) (Rab-9L) |
Synonyms | RAB9L |
Description | FUNCTION: Involved in the transport of proteins between the endosomes and the trans Golgi network. . |
Accessions | ENST00000243298.3 Q9NP90 |