Name | Number of supported studies | Average coverage | |
---|---|---|---|
glutamatergic neuron | 9 studies | 49% ± 18% | |
GABAergic neuron | 6 studies | 43% ± 16% | |
neuron | 5 studies | 34% ± 12% | |
retinal ganglion cell | 4 studies | 76% ± 19% | |
astrocyte | 4 studies | 31% ± 9% | |
interneuron | 4 studies | 45% ± 22% | |
endothelial cell | 3 studies | 33% ± 10% | |
GABAergic interneuron | 3 studies | 25% ± 4% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 10 studies | 32% ± 18% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 14840.74 | 2642 / 2642 | 100% | 108.10 | 702 / 705 |
thymus | 56% | 683.50 | 364 / 653 | 61% | 5.37 | 370 / 605 |
kidney | 24% | 282.87 | 21 / 89 | 81% | 17.48 | 729 / 901 |
ovary | 11% | 134.88 | 20 / 180 | 91% | 16.60 | 390 / 430 |
prostate | 12% | 129.58 | 29 / 245 | 85% | 10.05 | 427 / 502 |
adrenal gland | 15% | 242.34 | 38 / 258 | 77% | 27.13 | 176 / 230 |
esophagus | 61% | 1157.17 | 877 / 1445 | 29% | 6.61 | 53 / 183 |
heart | 88% | 2177.66 | 761 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 85% | 13.24 | 68 / 80 |
skin | 1% | 6.93 | 12 / 1809 | 80% | 21.01 | 376 / 472 |
intestine | 59% | 973.68 | 574 / 966 | 11% | 1.08 | 59 / 527 |
lung | 13% | 134.73 | 76 / 578 | 57% | 16.72 | 657 / 1155 |
breast | 40% | 516.51 | 185 / 459 | 28% | 3.38 | 310 / 1118 |
pancreas | 12% | 124.71 | 40 / 328 | 53% | 5.67 | 94 / 178 |
spleen | 62% | 815.63 | 150 / 241 | 0% | 0 | 0 / 0 |
uterus | 31% | 338.61 | 53 / 170 | 30% | 5.00 | 136 / 459 |
adipose | 56% | 742.88 | 677 / 1204 | 0% | 0 | 0 / 0 |
stomach | 30% | 439.86 | 106 / 359 | 20% | 1.66 | 56 / 286 |
blood vessel | 44% | 584.73 | 594 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 31% | 3.40 | 9 / 29 |
bladder | 0% | 0 | 0 / 21 | 20% | 2.93 | 102 / 504 |
tonsil | 0% | 0 | 0 / 0 | 16% | 4.88 | 7 / 45 |
liver | 0% | 0 | 0 / 226 | 12% | 1.89 | 50 / 406 |
peripheral blood | 2% | 26.29 | 19 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
muscle | 0% | 0 | 0 / 803 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0042147 | Biological process | retrograde transport, endosome to Golgi |
GO_1903292 | Biological process | protein localization to Golgi membrane |
GO_0007030 | Biological process | Golgi organization |
GO_0006886 | Biological process | intracellular protein transport |
GO_0006890 | Biological process | retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum |
GO_0006891 | Biological process | intra-Golgi vesicle-mediated transport |
GO_0031175 | Biological process | neuron projection development |
GO_0000139 | Cellular component | Golgi membrane |
GO_0098793 | Cellular component | presynapse |
GO_0005829 | Cellular component | cytosol |
GO_0005793 | Cellular component | endoplasmic reticulum-Golgi intermediate compartment |
GO_0005794 | Cellular component | Golgi apparatus |
GO_0031410 | Cellular component | cytoplasmic vesicle |
GO_0012505 | Cellular component | endomembrane system |
GO_0031489 | Molecular function | myosin V binding |
GO_0005525 | Molecular function | GTP binding |
GO_0005515 | Molecular function | protein binding |
GO_0003924 | Molecular function | GTPase activity |
Gene name | RAB6B |
Protein name | GTP-binding protein RAB6B Ras-related protein Rab-6B (EC 3.6.5.2) RAB6B, member RAS oncogene family RAB6B protein |
Synonyms | |
Description | FUNCTION: The small GTPases Rab are key regulators of intracellular membrane trafficking, from the formation of transport vesicles to their fusion with membranes. Rabs cycle between active GTP-bound and inactive GDP-bound states. In their active state, drive transport of vesicular carriers from donor organelles to acceptor organelles to regulate the membrane traffic that maintains organelle identity and morphology (Probable). Recruits VPS13B to the Golgi membrane . Regulates the compacted morphology of the Golgi . Seems to have a role in retrograde membrane traffic at the level of the Golgi complex. May function in retrograde transport in neuronal cells . Plays a role in neuron projection development . . |
Accessions | ENST00000486858.5 [Q9NRW1-2] J3KR73 C9J0I2 Q9UL29 ENST00000543906.5 [Q9NRW1-1] ENST00000285208.9 [Q9NRW1-1] ENST00000477759.5 C9JB90 Q9NRW1 C9JU14 ENST00000460865.3 Q6AZ91 ENST00000469959.1 ENST00000488969.1 |