Name | Number of supported studies  | Average coverage | |
|---|---|---|---|
| glutamatergic neuron | 7 studies | 36% ± 23% | |
| type II pneumocyte | 6 studies | 20% ± 4% | |
| epithelial cell | 4 studies | 28% ± 11% | |
| ciliated cell | 4 studies | 23% ± 4% | |
| endothelial cell | 3 studies | 25% ± 8% | |
| microglial cell | 3 studies | 18% ± 2% | |
| astrocyte | 3 studies | 22% ± 4% | |
| basal cell | 3 studies | 30% ± 6% |
Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| brain | 6 studies | 30% ± 15% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
|---|---|---|---|---|---|---|
| pancreas | 100% | 3514.82 | 328 / 328 | 100% | 28.13 | 178 / 178 |
| uterus | 100% | 2161.62 | 170 / 170 | 100% | 38.67 | 459 / 459 |
| esophagus | 100% | 2848.38 | 1443 / 1445 | 100% | 36.55 | 183 / 183 |
| ovary | 100% | 2030.69 | 180 / 180 | 100% | 26.98 | 429 / 430 |
| stomach | 100% | 2447.48 | 359 / 359 | 100% | 35.55 | 285 / 286 |
| prostate | 100% | 3593.08 | 245 / 245 | 100% | 36.21 | 500 / 502 |
| intestine | 100% | 2857.60 | 965 / 966 | 100% | 37.02 | 525 / 527 |
| kidney | 100% | 2270.70 | 89 / 89 | 99% | 27.06 | 895 / 901 |
| breast | 100% | 2032.45 | 458 / 459 | 99% | 35.57 | 1110 / 1118 |
| thymus | 100% | 2102.86 | 651 / 653 | 99% | 25.58 | 600 / 605 |
| bladder | 100% | 2956.14 | 21 / 21 | 99% | 37.59 | 497 / 504 |
| lung | 99% | 2527.05 | 573 / 578 | 99% | 38.19 | 1143 / 1155 |
| skin | 100% | 6747.74 | 1807 / 1809 | 98% | 20.13 | 463 / 472 |
| brain | 98% | 3634.72 | 2591 / 2642 | 100% | 31.18 | 704 / 705 |
| adrenal gland | 100% | 1372.40 | 257 / 258 | 97% | 16.67 | 222 / 230 |
| liver | 100% | 1559.07 | 225 / 226 | 93% | 13.75 | 378 / 406 |
| eye | 0% | 0 | 0 / 0 | 100% | 16.28 | 80 / 80 |
| lymph node | 0% | 0 | 0 / 0 | 100% | 16.69 | 29 / 29 |
| spleen | 100% | 1689.10 | 241 / 241 | 0% | 0 | 0 / 0 |
| tonsil | 0% | 0 | 0 / 0 | 100% | 38.44 | 45 / 45 |
| ureter | 0% | 0 | 0 / 0 | 100% | 30.10 | 1 / 1 |
| blood vessel | 100% | 2341.97 | 1331 / 1335 | 0% | 0 | 0 / 0 |
| adipose | 99% | 1649.73 | 1194 / 1204 | 0% | 0 | 0 / 0 |
| muscle | 97% | 1527.71 | 779 / 803 | 0% | 0 | 0 / 0 |
| heart | 93% | 1253.28 | 801 / 861 | 0% | 0 | 0 / 0 |
| peripheral blood | 88% | 1271.73 | 820 / 929 | 0% | 0 | 0 / 0 |
| abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| GO_0016567 | Biological process | protein ubiquitination |
| GO_0035556 | Biological process | intracellular signal transduction |
| GO_0006887 | Biological process | exocytosis |
| GO_0009306 | Biological process | protein secretion |
| GO_0005768 | Cellular component | endosome |
| GO_0008021 | Cellular component | synaptic vesicle |
| GO_0005794 | Cellular component | Golgi apparatus |
| GO_0005886 | Cellular component | plasma membrane |
| GO_0005811 | Cellular component | lipid droplet |
| GO_0048471 | Cellular component | perinuclear region of cytoplasm |
| GO_0019003 | Molecular function | GDP binding |
| GO_0005525 | Molecular function | GTP binding |
| GO_0003924 | Molecular function | GTPase activity |
| Gene name | RAB40C |
| Protein name | Ras-related protein Rab-40C (Rar-like protein) (Ras-like protein family member 8C) (SOCS box-containing protein RAR3) RAB40C, member RAS oncogene family |
| Synonyms | RASL8C RARL |
| Description | FUNCTION: Probable substrate-recognition component of a SCF-like ECS (Elongin-Cullin-SOCS-box protein) E3 ubiquitin ligase complex which mediates the ubiquitination and subsequent proteasomal degradation of target proteins. . |
| Accessions | ENST00000538492.5 [Q96S21-1] H3BPA5 ENST00000563109.1 H3BME4 ENST00000535977.5 [Q96S21-1] ENST00000564703.1 ENST00000569575.5 ENST00000509637.6 ENST00000565511.5 H3BUX0 H3BMH4 Q96S21 ENST00000539661.5 [Q96S21-1] H3BNV8 ENST00000568586.5 ENST00000248139.8 [Q96S21-1] H3BTC6 H3BPB1 ENST00000566290.5 |
