R3HCC1 report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
retinal rod cell	4 studies	31% ± 15%	Explore
plasmablast	3 studies	30% ± 11%	Explore
endothelial cell	3 studies	23% ± 7%	Explore
fibroblast	3 studies	19% ± 1%	Explore
smooth muscle cell	3 studies	18% ± 2%	Explore
epithelial cell	3 studies	28% ± 9%	Explore
dendritic cell	3 studies	21% ± 6%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
lung	3 studies	19% ± 2%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
pancreas	100%	1901.40	328 / 328	100%	38.12	178 / 178
thymus	100%	1558.93	653 / 653	100%	47.94	605 / 605
brain	100%	2007.08	2640 / 2642	100%	78.02	705 / 705
kidney	100%	1460.47	89 / 89	100%	41.69	899 / 901
liver	100%	1198.31	226 / 226	100%	28.66	405 / 406
adrenal gland	100%	1688.88	258 / 258	100%	50.93	229 / 230
uterus	100%	1994.33	170 / 170	100%	43.86	457 / 459
prostate	100%	1985.44	245 / 245	99%	48.72	499 / 502
esophagus	100%	1903.92	1444 / 1445	99%	22.69	182 / 183
skin	100%	1658.66	1809 / 1809	99%	46.79	469 / 472
intestine	100%	2138.83	966 / 966	99%	31.64	523 / 527
lung	100%	1382.23	576 / 578	99%	32.06	1149 / 1155
breast	100%	1651.15	459 / 459	99%	37.72	1106 / 1118
stomach	100%	1808.94	359 / 359	99%	29.17	282 / 286
bladder	100%	1781.81	21 / 21	98%	35.09	496 / 504
ovary	100%	1906.32	180 / 180	98%	24.04	423 / 430
adipose	100%	1541.38	1204 / 1204	0%	0	0 / 0
lymph node	0%	0	0 / 0	100%	43.52	29 / 29
spleen	100%	1637.44	241 / 241	0%	0	0 / 0
tonsil	0%	0	0 / 0	100%	45.11	45 / 45
ureter	0%	0	0 / 0	100%	17.37	1 / 1
blood vessel	100%	2095.24	1334 / 1335	0%	0	0 / 0
muscle	100%	1941.45	802 / 803	0%	0	0 / 0
heart	99%	1560.05	856 / 861	0%	0	0 / 0
eye	0%	0	0 / 0	94%	41.55	75 / 80
peripheral blood	90%	769.39	833 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0