Name | Number of supported studies | Average coverage | |
---|---|---|---|
epithelial cell | 4 studies | 24% ± 8% | |
glutamatergic neuron | 4 studies | 28% ± 5% | |
dendritic cell | 3 studies | 26% ± 7% | |
astrocyte | 3 studies | 26% ± 6% | |
interneuron | 3 studies | 25% ± 4% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 4 studies | 24% ± 5% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 955.62 | 1445 / 1445 | 100% | 13.72 | 183 / 183 |
lung | 100% | 1136.09 | 578 / 578 | 100% | 12.48 | 1155 / 1155 |
ovary | 100% | 971.77 | 180 / 180 | 100% | 10.97 | 430 / 430 |
breast | 100% | 1172.13 | 459 / 459 | 100% | 14.88 | 1116 / 1118 |
intestine | 100% | 968.67 | 966 / 966 | 100% | 12.76 | 526 / 527 |
bladder | 100% | 1025.76 | 21 / 21 | 100% | 11.81 | 502 / 504 |
prostate | 100% | 1038.12 | 245 / 245 | 99% | 9.39 | 499 / 502 |
skin | 100% | 1295.42 | 1809 / 1809 | 99% | 13.80 | 468 / 472 |
uterus | 100% | 1124.75 | 170 / 170 | 99% | 12.97 | 454 / 459 |
stomach | 99% | 774.94 | 356 / 359 | 100% | 12.28 | 285 / 286 |
pancreas | 100% | 632.27 | 327 / 328 | 99% | 9.11 | 176 / 178 |
thymus | 100% | 1239.61 | 653 / 653 | 99% | 8.04 | 596 / 605 |
kidney | 100% | 857.63 | 89 / 89 | 98% | 7.53 | 883 / 901 |
brain | 98% | 454.06 | 2579 / 2642 | 99% | 6.59 | 697 / 705 |
adrenal gland | 100% | 1183.72 | 258 / 258 | 93% | 6.19 | 214 / 230 |
liver | 100% | 553.16 | 225 / 226 | 87% | 4.37 | 352 / 406 |
adipose | 100% | 1107.61 | 1204 / 1204 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 12.78 | 29 / 29 |
spleen | 100% | 1577.51 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 16.07 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 2.89 | 1 / 1 |
blood vessel | 100% | 715.14 | 1332 / 1335 | 0% | 0 | 0 / 0 |
heart | 97% | 406.38 | 833 / 861 | 0% | 0 | 0 / 0 |
muscle | 95% | 366.72 | 763 / 803 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 93% | 6.09 | 74 / 80 |
peripheral blood | 77% | 800.52 | 716 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0101030 | Biological process | tRNA-guanine transglycosylation |
GO_0005741 | Cellular component | mitochondrial outer membrane |
GO_0032991 | Cellular component | protein-containing complex |
GO_1990234 | Cellular component | transferase complex |
GO_0005737 | Cellular component | cytoplasm |
GO_0005739 | Cellular component | mitochondrion |
GO_0046982 | Molecular function | protein heterodimerization activity |
GO_0042803 | Molecular function | protein homodimerization activity |
GO_0000049 | Molecular function | tRNA binding |
GO_0046872 | Molecular function | metal ion binding |
GO_0008479 | Molecular function | tRNA-guanosine(34) queuine transglycosylase activity |
GO_0005515 | Molecular function | protein binding |
Gene name | QTRT2 |
Protein name | Queuine tRNA-ribosyltransferase accessory subunit 2 (Queuine tRNA-ribosyltransferase domain-containing protein 1) Queuine tRNA-ribosyltransferase accessory subunit 2 |
Synonyms | QTRTD1 |
Description | FUNCTION: Non-catalytic subunit of the queuine tRNA-ribosyltransferase (TGT) that catalyzes the base-exchange of a guanine (G) residue with queuine (Q) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2-cyclopenten-1-yl)amino)methyl)-7-deazaguanosine). . |
Accessions | Q9H974 ENST00000472599.5 ENST00000482307.1 A0A1D5RMQ5 ENST00000493014.1 [Q9H974-3] ENST00000281273.8 [Q9H974-1] C9JJ71 C9K0B6 ENST00000479882.5 [Q9H974-2] ENST00000462966.1 ENST00000485050.5 [Q9H974-4] |