Name | Number of supported studies | Average coverage | |
---|---|---|---|
astrocyte | 9 studies | 29% ± 12% | |
glutamatergic neuron | 5 studies | 38% ± 20% | |
epithelial cell | 5 studies | 26% ± 9% | |
retinal cone cell | 5 studies | 24% ± 5% | |
cardiac muscle cell | 5 studies | 29% ± 4% | |
GABAergic neuron | 5 studies | 32% ± 16% | |
ionocyte | 3 studies | 33% ± 13% | |
neuron | 3 studies | 32% ± 3% | |
retinal ganglion cell | 3 studies | 50% ± 21% | |
abnormal cell | 3 studies | 28% ± 7% | |
oligodendrocyte precursor cell | 3 studies | 25% ± 1% | |
interneuron | 3 studies | 31% ± 16% | |
oligodendrocyte | 3 studies | 17% ± 2% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 8 studies | 24% ± 11% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
prostate | 100% | 23830.45 | 245 / 245 | 100% | 310.76 | 501 / 502 |
skin | 100% | 15283.60 | 1809 / 1809 | 99% | 468.48 | 469 / 472 |
brain | 99% | 14363.82 | 2621 / 2642 | 100% | 304.85 | 703 / 705 |
thymus | 100% | 9437.35 | 650 / 653 | 99% | 180.30 | 599 / 605 |
intestine | 100% | 22064.43 | 965 / 966 | 98% | 410.82 | 516 / 527 |
esophagus | 100% | 29795.48 | 1444 / 1445 | 98% | 270.17 | 179 / 183 |
breast | 98% | 11089.61 | 452 / 459 | 98% | 162.52 | 1096 / 1118 |
kidney | 100% | 8221.94 | 89 / 89 | 94% | 154.41 | 846 / 901 |
bladder | 100% | 31131.57 | 21 / 21 | 93% | 215.02 | 468 / 504 |
lung | 96% | 6539.24 | 554 / 578 | 96% | 179.92 | 1112 / 1155 |
uterus | 98% | 8755.32 | 166 / 170 | 94% | 124.93 | 432 / 459 |
stomach | 94% | 7373.60 | 338 / 359 | 97% | 377.02 | 277 / 286 |
adrenal gland | 97% | 7187.58 | 250 / 258 | 85% | 87.53 | 195 / 230 |
ovary | 89% | 4918.36 | 160 / 180 | 86% | 79.08 | 368 / 430 |
pancreas | 48% | 1957.48 | 159 / 328 | 97% | 238.52 | 173 / 178 |
eye | 0% | 0 | 0 / 0 | 100% | 358.00 | 80 / 80 |
ureter | 0% | 0 | 0 / 0 | 100% | 80.46 | 1 / 1 |
blood vessel | 100% | 20884.26 | 1334 / 1335 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 98% | 126.16 | 44 / 45 |
heart | 97% | 18634.92 | 837 / 861 | 0% | 0 | 0 / 0 |
adipose | 96% | 8642.81 | 1156 / 1204 | 0% | 0 | 0 / 0 |
spleen | 96% | 4611.66 | 231 / 241 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 59% | 36.77 | 17 / 29 |
liver | 9% | 430.17 | 20 / 226 | 46% | 53.67 | 186 / 406 |
peripheral blood | 28% | 1216.43 | 264 / 929 | 0% | 0 | 0 / 0 |
muscle | 24% | 1102.56 | 193 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0005980 | Biological process | glycogen catabolic process |
GO_0035578 | Cellular component | azurophil granule lumen |
GO_0070062 | Cellular component | extracellular exosome |
GO_0005576 | Cellular component | extracellular region |
GO_0016020 | Cellular component | membrane |
GO_0005737 | Cellular component | cytoplasm |
GO_0102499 | Molecular function | SHG alpha-glucan phosphorylase activity |
GO_0008184 | Molecular function | glycogen phosphorylase activity |
GO_0005515 | Molecular function | protein binding |
GO_0102250 | Molecular function | linear malto-oligosaccharide phosphorylase activity |
GO_0030170 | Molecular function | pyridoxal phosphate binding |
Gene name | PYGB |
Protein name | Glycogen phosphorylase, brain form (EC 2.4.1.1) Alpha-1,4 glucan phosphorylase (EC 2.4.1.1) |
Synonyms | |
Description | FUNCTION: Glycogen phosphorylase that regulates glycogen mobilization . Phosphorylase is an important allosteric enzyme in carbohydrate metabolism . Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates . However, all known phosphorylases share catalytic and structural properties . . FUNCTION: Allosteric enzyme that catalyzes the rate-limiting step in glycogen catabolism, the phosphorolytic cleavage of glycogen to produce glucose-1-phosphate, and plays a central role in maintaining cellular and organismal glucose homeostasis. . |
Accessions | ENST00000216962.9 ENST00000428458.1 H0Y4Z6 P11216 |