Name | Number of supported studies | Average coverage | |
---|---|---|---|
glutamatergic neuron | 5 studies | 35% ± 16% | |
oligodendrocyte precursor cell | 4 studies | 26% ± 9% | |
GABAergic neuron | 3 studies | 41% ± 5% | |
neuron | 3 studies | 18% ± 1% | |
interneuron | 3 studies | 36% ± 24% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 4 studies | 31% ± 13% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 938.07 | 2638 / 2642 | 100% | 15.17 | 703 / 705 |
prostate | 100% | 1236.68 | 245 / 245 | 99% | 6.79 | 497 / 502 |
breast | 99% | 778.23 | 454 / 459 | 97% | 7.16 | 1088 / 1118 |
thymus | 100% | 739.05 | 653 / 653 | 94% | 7.87 | 569 / 605 |
uterus | 100% | 1133.98 | 170 / 170 | 92% | 6.71 | 424 / 459 |
pancreas | 100% | 720.35 | 328 / 328 | 92% | 4.31 | 163 / 178 |
bladder | 100% | 629.00 | 21 / 21 | 91% | 6.43 | 458 / 504 |
intestine | 100% | 709.79 | 966 / 966 | 91% | 4.42 | 478 / 527 |
ovary | 100% | 957.05 | 180 / 180 | 91% | 4.51 | 390 / 430 |
lung | 100% | 811.59 | 577 / 578 | 89% | 5.44 | 1031 / 1155 |
stomach | 100% | 620.18 | 358 / 359 | 88% | 4.71 | 253 / 286 |
kidney | 100% | 616.55 | 89 / 89 | 83% | 5.15 | 744 / 901 |
esophagus | 95% | 415.13 | 1379 / 1445 | 83% | 4.38 | 151 / 183 |
adrenal gland | 100% | 620.05 | 258 / 258 | 78% | 4.87 | 179 / 230 |
skin | 100% | 660.39 | 1808 / 1809 | 72% | 3.95 | 339 / 472 |
liver | 86% | 241.22 | 194 / 226 | 34% | 1.26 | 139 / 406 |
blood vessel | 100% | 1065.91 | 1335 / 1335 | 0% | 0 | 0 / 0 |
spleen | 100% | 889.90 | 241 / 241 | 0% | 0 | 0 / 0 |
adipose | 100% | 646.13 | 1201 / 1204 | 0% | 0 | 0 / 0 |
heart | 97% | 723.92 | 837 / 861 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 82% | 7.55 | 37 / 45 |
muscle | 67% | 179.59 | 542 / 803 | 0% | 0 | 0 / 0 |
peripheral blood | 64% | 633.45 | 597 / 929 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 15% | 0.42 | 12 / 80 |
lymph node | 0% | 0 | 0 / 0 | 7% | 0.20 | 2 / 29 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0010909 | Biological process | positive regulation of heparan sulfate proteoglycan biosynthetic process |
GO_0050650 | Biological process | chondroitin sulfate proteoglycan biosynthetic process |
GO_0016311 | Biological process | dephosphorylation |
GO_0006024 | Biological process | glycosaminoglycan biosynthetic process |
GO_0000139 | Cellular component | Golgi membrane |
GO_0005794 | Cellular component | Golgi apparatus |
GO_0016791 | Molecular function | phosphatase activity |
GO_0005515 | Molecular function | protein binding |
Gene name | PXYLP1 |
Protein name | 2-phosphoxylose phosphatase 1 (EC 3.1.3.-) (Acid phosphatase-like protein 2) (Xylosyl phosphatase) (epididymis luminal protein 124) 2-phosphoxylose phosphatase 1 (Acid phosphatase-like protein 2) 2-phosphoxylose phosphatase 1 |
Synonyms | ACPL2 HEL124 UNQ370/PRO706 XYLP |
Description | FUNCTION: Responsible for the 2-O-dephosphorylation of xylose in the glycosaminoglycan-protein linkage region of proteoglycans thereby regulating the amount of mature glycosaminoglycan (GAG) chains. Sulfated glycosaminoglycans (GAGs), including heparan sulfate and chondroitin sulfate, are synthesized on the so-called common GAG-protein linkage region (GlcUAbeta1-3Galbeta1-3Galbeta1-4Xylbeta1-O-Ser) of core proteins, which is formed by the stepwise addition of monosaccharide residues by the respective specific glycosyltransferases. Xylose 2-O-dephosphorylation during completion of linkage region formation is a prerequisite for the initiation and efficient elongation of the repeating disaccharide region of GAG chains. . |
Accessions | ENST00000637579.1 D6RDP0 ENST00000513528.5 ENST00000508812.1 D6R928 A0A1B0GUH7 ENST00000636601.1 D6RGE3 D6RE60 Q8TE99 ENST00000393010.6 [Q8TE99-1] B7Z3R9 ENST00000514680.5 ENST00000514880.5 ENST00000512457.5 E9PDB7 ENST00000286353.9 [Q8TE99-1] ENST00000505013.5 ENST00000504264.5 ENST00000502783.5 A0A1B0GWB5 ENST00000637751.1 B7Z4T2 |