Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 11 studies | 25% ± 7% | |
astrocyte | 9 studies | 37% ± 13% | |
glutamatergic neuron | 8 studies | 36% ± 21% | |
oligodendrocyte precursor cell | 8 studies | 26% ± 10% | |
fibroblast | 7 studies | 23% ± 7% | |
pericyte | 6 studies | 21% ± 5% | |
epithelial cell | 5 studies | 21% ± 4% | |
dendritic cell | 5 studies | 18% ± 2% | |
GABAergic neuron | 5 studies | 40% ± 18% | |
microglial cell | 5 studies | 22% ± 6% | |
macrophage | 5 studies | 22% ± 6% | |
type I pneumocyte | 4 studies | 20% ± 5% | |
myeloid cell | 3 studies | 26% ± 11% | |
smooth muscle cell | 3 studies | 29% ± 11% | |
alveolar macrophage | 3 studies | 29% ± 9% | |
neuron | 3 studies | 24% ± 7% | |
interneuron | 3 studies | 46% ± 21% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 8 studies | 32% ± 18% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 2580.91 | 1445 / 1445 | 100% | 20.24 | 183 / 183 |
stomach | 100% | 1833.77 | 359 / 359 | 100% | 17.49 | 286 / 286 |
lung | 100% | 2469.57 | 578 / 578 | 100% | 17.91 | 1153 / 1155 |
intestine | 100% | 2769.22 | 966 / 966 | 100% | 17.72 | 526 / 527 |
prostate | 100% | 2915.41 | 245 / 245 | 100% | 18.93 | 501 / 502 |
breast | 100% | 2860.77 | 459 / 459 | 100% | 22.10 | 1115 / 1118 |
ovary | 100% | 2498.50 | 180 / 180 | 100% | 17.88 | 428 / 430 |
thymus | 100% | 5324.63 | 653 / 653 | 100% | 27.00 | 602 / 605 |
bladder | 100% | 2652.71 | 21 / 21 | 99% | 16.58 | 501 / 504 |
uterus | 100% | 3099.83 | 170 / 170 | 99% | 17.40 | 456 / 459 |
brain | 99% | 1863.94 | 2625 / 2642 | 100% | 20.61 | 704 / 705 |
skin | 100% | 2545.43 | 1809 / 1809 | 99% | 27.21 | 467 / 472 |
kidney | 100% | 2394.98 | 89 / 89 | 99% | 20.07 | 888 / 901 |
adrenal gland | 100% | 2052.76 | 258 / 258 | 93% | 13.40 | 213 / 230 |
pancreas | 94% | 930.66 | 309 / 328 | 98% | 19.56 | 175 / 178 |
liver | 99% | 1054.74 | 223 / 226 | 86% | 8.61 | 351 / 406 |
adipose | 100% | 2859.05 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 2806.59 | 1335 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 15.48 | 29 / 29 |
spleen | 100% | 2038.10 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 11.62 | 1 / 1 |
heart | 99% | 1307.97 | 852 / 861 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 98% | 14.15 | 44 / 45 |
eye | 0% | 0 | 0 / 0 | 96% | 12.70 | 77 / 80 |
peripheral blood | 79% | 1148.20 | 732 / 929 | 0% | 0 | 0 / 0 |
muscle | 79% | 638.46 | 632 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_1903078 | Biological process | positive regulation of protein localization to plasma membrane |
GO_0010977 | Biological process | negative regulation of neuron projection development |
GO_0006470 | Biological process | protein dephosphorylation |
GO_0035335 | Biological process | peptidyl-tyrosine dephosphorylation |
GO_0005654 | Cellular component | nucleoplasm |
GO_0044306 | Cellular component | neuron projection terminus |
GO_0005737 | Cellular component | cytoplasm |
GO_0004726 | Molecular function | non-membrane spanning protein tyrosine phosphatase activity |
GO_0005515 | Molecular function | protein binding |
GO_0004725 | Molecular function | protein tyrosine phosphatase activity |
Gene name | PTPN9 |
Protein name | PTPN9 protein Tyrosine-protein phosphatase non-receptor type 9 (EC 3.1.3.48) (Protein-tyrosine phosphatase MEG2) (PTPase MEG2) Protein tyrosine phosphatase non-receptor type 9 |
Synonyms | |
Description | FUNCTION: Protein-tyrosine phosphatase that could participate in the transfer of hydrophobic ligands or in functions of the Golgi apparatus. . |
Accessions | H3BQT6 ENST00000561731.1 Q6IQ43 P43378 ENST00000618819.5 |