Name | Number of supported studies  | Average coverage | |
|---|---|---|---|
| oligodendrocyte | 10 studies | 30% ± 9% | |
| cardiac muscle cell | 4 studies | 20% ± 3% | |
| glutamatergic neuron | 4 studies | 49% ± 16% | |
| fibroblast | 4 studies | 20% ± 1% | |
| GABAergic neuron | 3 studies | 37% ± 7% | |
| astrocyte | 3 studies | 26% ± 7% | |
| interneuron | 3 studies | 29% ± 11% |
Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| brain | 5 studies | 40% ± 11% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
|---|---|---|---|---|---|---|
| stomach | 100% | 921.52 | 359 / 359 | 100% | 5.20 | 285 / 286 |
| prostate | 100% | 877.27 | 245 / 245 | 100% | 4.46 | 500 / 502 |
| lung | 100% | 1207.50 | 576 / 578 | 100% | 5.87 | 1154 / 1155 |
| breast | 100% | 823.19 | 459 / 459 | 100% | 6.30 | 1113 / 1118 |
| pancreas | 100% | 678.23 | 328 / 328 | 99% | 5.68 | 177 / 178 |
| uterus | 100% | 901.26 | 170 / 170 | 99% | 5.87 | 456 / 459 |
| intestine | 100% | 921.64 | 965 / 966 | 99% | 5.09 | 524 / 527 |
| bladder | 100% | 654.67 | 21 / 21 | 99% | 4.94 | 500 / 504 |
| adrenal gland | 100% | 1080.19 | 258 / 258 | 99% | 8.41 | 228 / 230 |
| ovary | 100% | 751.74 | 180 / 180 | 99% | 3.99 | 426 / 430 |
| kidney | 100% | 768.17 | 89 / 89 | 99% | 4.73 | 892 / 901 |
| brain | 100% | 1297.84 | 2637 / 2642 | 99% | 5.70 | 699 / 705 |
| thymus | 100% | 972.16 | 652 / 653 | 99% | 4.57 | 598 / 605 |
| skin | 99% | 798.41 | 1798 / 1809 | 98% | 6.06 | 464 / 472 |
| esophagus | 98% | 905.18 | 1409 / 1445 | 100% | 7.56 | 183 / 183 |
| liver | 50% | 154.02 | 114 / 226 | 65% | 1.52 | 264 / 406 |
| adipose | 100% | 927.34 | 1204 / 1204 | 0% | 0 | 0 / 0 |
| spleen | 100% | 487.55 | 241 / 241 | 0% | 0 | 0 / 0 |
| tonsil | 0% | 0 | 0 / 0 | 100% | 5.73 | 45 / 45 |
| ureter | 0% | 0 | 0 / 0 | 100% | 1.81 | 1 / 1 |
| blood vessel | 100% | 1059.08 | 1331 / 1335 | 0% | 0 | 0 / 0 |
| muscle | 99% | 685.31 | 796 / 803 | 0% | 0 | 0 / 0 |
| heart | 98% | 1170.94 | 844 / 861 | 0% | 0 | 0 / 0 |
| lymph node | 0% | 0 | 0 / 0 | 93% | 2.71 | 27 / 29 |
| eye | 0% | 0 | 0 / 0 | 84% | 3.46 | 67 / 80 |
| peripheral blood | 20% | 134.21 | 183 / 929 | 0% | 0 | 0 / 0 |
| abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| GO_0060271 | Biological process | cilium assembly |
| GO_0005654 | Cellular component | nucleoplasm |
| GO_0005737 | Cellular component | cytoplasm |
| GO_0005515 | Molecular function | protein binding |
| GO_0004725 | Molecular function | protein tyrosine phosphatase activity |
| Gene name | PTPDC1 |
| Protein name | Protein tyrosine phosphatase domain-containing protein 1 (EC 3.1.3.-) Alternative protein PTPDC1 Protein tyrosine phosphatase domain containing 1 |
| Synonyms | PTP9Q22 |
| Description | FUNCTION: May play roles in cilia formation and/or maintenance. . |
| Accessions | ENST00000288976.3 [A2A3K4-2] ENST00000375360.7 [A2A3K4-1] ENST00000620992.5 A2A3K4 A0A087WTF0 L8ECP2 ENST00000650567.1 [A2A3K4-1] |
