Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 13 studies | 26% ± 10% | |
astrocyte | 12 studies | 37% ± 14% | |
oligodendrocyte precursor cell | 9 studies | 28% ± 14% | |
oligodendrocyte | 7 studies | 24% ± 8% | |
microglial cell | 6 studies | 23% ± 7% | |
epithelial cell | 6 studies | 27% ± 5% | |
macrophage | 5 studies | 25% ± 6% | |
retinal cone cell | 4 studies | 35% ± 4% | |
adipocyte | 4 studies | 24% ± 5% | |
ciliated cell | 4 studies | 21% ± 3% | |
fibroblast | 4 studies | 20% ± 3% | |
B cell | 3 studies | 21% ± 3% | |
CD16-positive, CD56-dim natural killer cell, human | 3 studies | 18% ± 3% | |
CD4-positive, alpha-beta T cell | 3 studies | 21% ± 4% | |
CD8-positive, alpha-beta T cell | 3 studies | 19% ± 3% | |
hepatocyte | 3 studies | 32% ± 12% | |
GABAergic neuron | 3 studies | 40% ± 9% | |
glutamatergic neuron | 3 studies | 42% ± 11% | |
neural progenitor cell | 3 studies | 23% ± 4% | |
club cell | 3 studies | 21% ± 6% | |
endothelial cell of lymphatic vessel | 3 studies | 21% ± 3% | |
type I pneumocyte | 3 studies | 21% ± 6% | |
basal cell | 3 studies | 25% ± 7% | |
goblet cell | 3 studies | 37% ± 18% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 3466.25 | 1445 / 1445 | 100% | 17.26 | 183 / 183 |
brain | 100% | 2181.07 | 2631 / 2642 | 100% | 17.39 | 705 / 705 |
lung | 100% | 4700.55 | 578 / 578 | 99% | 11.92 | 1142 / 1155 |
pancreas | 100% | 2512.32 | 327 / 328 | 98% | 10.11 | 175 / 178 |
breast | 100% | 4105.89 | 459 / 459 | 98% | 14.10 | 1092 / 1118 |
prostate | 100% | 3038.93 | 245 / 245 | 97% | 10.96 | 489 / 502 |
thymus | 100% | 3768.33 | 653 / 653 | 97% | 10.99 | 588 / 605 |
kidney | 100% | 2810.08 | 89 / 89 | 96% | 16.92 | 869 / 901 |
ovary | 100% | 4518.00 | 180 / 180 | 96% | 7.65 | 413 / 430 |
stomach | 100% | 2493.62 | 359 / 359 | 96% | 11.08 | 274 / 286 |
intestine | 100% | 4357.66 | 966 / 966 | 95% | 9.84 | 500 / 527 |
uterus | 100% | 4898.82 | 170 / 170 | 95% | 9.98 | 435 / 459 |
adrenal gland | 100% | 2492.36 | 258 / 258 | 93% | 10.33 | 215 / 230 |
skin | 100% | 3895.49 | 1808 / 1809 | 92% | 15.59 | 435 / 472 |
bladder | 100% | 3650.10 | 21 / 21 | 90% | 8.41 | 454 / 504 |
liver | 100% | 1898.63 | 226 / 226 | 80% | 6.06 | 324 / 406 |
blood vessel | 100% | 3512.78 | 1335 / 1335 | 0% | 0 | 0 / 0 |
muscle | 100% | 2772.27 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 3557.26 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 4.48 | 1 / 1 |
adipose | 100% | 3771.90 | 1203 / 1204 | 0% | 0 | 0 / 0 |
heart | 98% | 2253.81 | 841 / 861 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 96% | 10.70 | 43 / 45 |
peripheral blood | 81% | 2047.11 | 755 / 929 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 76% | 5.93 | 22 / 29 |
eye | 0% | 0 | 0 / 0 | 70% | 6.39 | 56 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0018342 | Biological process | protein prenylation |
GO_0005737 | Cellular component | cytoplasm |
GO_0008318 | Molecular function | protein prenyltransferase activity |
Gene name | PTAR1 |
Protein name | Protein prenyltransferase alpha subunit repeat-containing protein 1 Protein prenyltransferase alpha subunit repeat containing 1 |
Synonyms | |
Description | |
Accessions | ENST00000415701.6 Q7Z6K3 F5GXY1 ENST00000472967.2 ENST00000340434.5 ENST00000377200.9 X6R9N0 J3KQP8 |