Insufficient scRNA-seq data for expression of PRICKLE3 at single-cell level.
Insufficient scRNA-seq data for expression of PRICKLE3 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 980.53 | 1445 / 1445 | 100% | 29.59 | 183 / 183 |
ovary | 100% | 490.97 | 180 / 180 | 100% | 31.78 | 430 / 430 |
skin | 100% | 1072.89 | 1808 / 1809 | 100% | 13.42 | 470 / 472 |
intestine | 100% | 641.89 | 966 / 966 | 99% | 15.68 | 524 / 527 |
uterus | 100% | 721.87 | 170 / 170 | 99% | 18.05 | 456 / 459 |
stomach | 100% | 502.77 | 359 / 359 | 99% | 17.32 | 284 / 286 |
lung | 100% | 768.98 | 577 / 578 | 99% | 17.71 | 1145 / 1155 |
thymus | 100% | 738.14 | 653 / 653 | 99% | 9.04 | 596 / 605 |
bladder | 100% | 924.86 | 21 / 21 | 98% | 18.15 | 496 / 504 |
breast | 100% | 744.90 | 459 / 459 | 98% | 10.42 | 1097 / 1118 |
pancreas | 99% | 367.74 | 325 / 328 | 98% | 11.48 | 175 / 178 |
prostate | 100% | 890.44 | 245 / 245 | 96% | 7.35 | 484 / 502 |
kidney | 100% | 462.75 | 89 / 89 | 92% | 6.49 | 828 / 901 |
liver | 100% | 328.33 | 226 / 226 | 64% | 3.40 | 258 / 406 |
adrenal gland | 100% | 659.78 | 258 / 258 | 56% | 4.70 | 128 / 230 |
adipose | 100% | 740.22 | 1204 / 1204 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 10.75 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 11.81 | 29 / 29 |
muscle | 100% | 1111.55 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 716.58 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 21.95 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 10.01 | 1 / 1 |
blood vessel | 100% | 656.37 | 1334 / 1335 | 0% | 0 | 0 / 0 |
heart | 99% | 576.37 | 853 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 98% | 672.58 | 908 / 929 | 0% | 0 | 0 / 0 |
brain | 38% | 71.46 | 1014 / 2642 | 32% | 1.94 | 229 / 705 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0030030 | Biological process | cell projection organization |
GO_0008150 | Biological process | biological_process |
GO_0005886 | Cellular component | plasma membrane |
GO_0005739 | Cellular component | mitochondrion |
GO_0005515 | Molecular function | protein binding |
GO_0008270 | Molecular function | zinc ion binding |
Gene name | PRICKLE3 |
Protein name | Prickle planar cell polarity protein 3 Prickle planar cell polarity protein 3 (LIM domain only protein 6) (LMO-6) (Prickle-like protein 3) (Pk3) (Triple LIM domain protein 6) |
Synonyms | LMO6 |
Description | FUNCTION: Involved in the planar cell polarity (PCP) pathway that is essential for the polarization of epithelial cells during morphogenetic processes, including gastrulation and neurulation (By similarity). PCP is maintained by two molecular modules, the global and the core modules, PRICKLE3 being part of the core module (By similarity). Distinct complexes of the core module segregate to opposite sides of the cell, where they interact with the opposite complex in the neighboring cell at or near the adherents junctions (By similarity). Involved in the organization of the basal body (By similarity). Involved in cilia growth and positioning (By similarity). Required for proper assembly, stability, and function of mitochondrial membrane ATP synthase (mitochondrial complex V) . . |
Accessions | F5H4N2 O43900 ENST00000540849.5 H7BZP7 ENST00000376317.4 ENST00000453382.5 H0Y413 A0A0A0MRT7 ENST00000599218.6 [O43900-1] ENST00000432913.5 |