Name | Number of supported studies | Average coverage | |
---|---|---|---|
astrocyte | 15 studies | 28% ± 13% | |
oligodendrocyte | 13 studies | 32% ± 12% | |
GABAergic neuron | 11 studies | 48% ± 26% | |
glutamatergic neuron | 11 studies | 63% ± 23% | |
oligodendrocyte precursor cell | 10 studies | 31% ± 13% | |
endothelial cell | 9 studies | 36% ± 17% | |
amacrine cell | 7 studies | 38% ± 12% | |
fibroblast | 7 studies | 22% ± 7% | |
neuron | 6 studies | 44% ± 17% | |
interneuron | 6 studies | 55% ± 29% | |
retinal ganglion cell | 6 studies | 69% ± 26% | |
epithelial cell | 6 studies | 31% ± 8% | |
microglial cell | 5 studies | 23% ± 4% | |
retina horizontal cell | 5 studies | 41% ± 12% | |
retinal cone cell | 5 studies | 29% ± 6% | |
retinal rod cell | 5 studies | 20% ± 3% | |
retinal bipolar neuron | 4 studies | 27% ± 7% | |
retinal pigment epithelial cell | 4 studies | 37% ± 15% | |
ciliated cell | 4 studies | 29% ± 9% | |
Mueller cell | 4 studies | 21% ± 5% | |
GABAergic interneuron | 3 studies | 50% ± 13% | |
macrophage | 3 studies | 24% ± 4% | |
cardiac muscle cell | 3 studies | 17% ± 3% | |
OFF-bipolar cell | 3 studies | 47% ± 21% | |
ON-bipolar cell | 3 studies | 51% ± 20% | |
rod bipolar cell | 3 studies | 39% ± 7% | |
mesothelial cell | 3 studies | 23% ± 5% | |
connective tissue cell | 3 studies | 16% ± 1% | |
ependymal cell | 3 studies | 34% ± 17% | |
goblet cell | 3 studies | 28% ± 13% | |
smooth muscle cell | 3 studies | 17% ± 2% | |
granule cell | 3 studies | 41% ± 4% | |
kidney loop of Henle epithelial cell | 3 studies | 19% ± 4% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
ovary | 100% | 5249.98 | 180 / 180 | 100% | 23.10 | 429 / 430 |
brain | 100% | 15561.42 | 2635 / 2642 | 100% | 54.99 | 703 / 705 |
prostate | 100% | 3423.07 | 244 / 245 | 100% | 25.66 | 500 / 502 |
kidney | 100% | 3590.99 | 89 / 89 | 98% | 28.93 | 886 / 901 |
thymus | 100% | 5249.55 | 651 / 653 | 99% | 28.93 | 596 / 605 |
breast | 99% | 3083.90 | 454 / 459 | 99% | 28.10 | 1107 / 1118 |
esophagus | 98% | 2932.53 | 1409 / 1445 | 100% | 21.92 | 183 / 183 |
adrenal gland | 100% | 4329.44 | 257 / 258 | 98% | 53.47 | 225 / 230 |
lung | 98% | 2872.54 | 564 / 578 | 99% | 19.05 | 1148 / 1155 |
intestine | 100% | 3124.57 | 964 / 966 | 96% | 17.32 | 506 / 527 |
stomach | 99% | 2661.37 | 354 / 359 | 97% | 19.18 | 277 / 286 |
bladder | 100% | 3623.19 | 21 / 21 | 95% | 14.32 | 481 / 504 |
uterus | 100% | 4952.43 | 170 / 170 | 95% | 15.87 | 434 / 459 |
skin | 96% | 2715.79 | 1745 / 1809 | 94% | 21.63 | 446 / 472 |
pancreas | 90% | 1909.93 | 296 / 328 | 97% | 17.06 | 172 / 178 |
liver | 63% | 1057.99 | 143 / 226 | 75% | 8.90 | 305 / 406 |
blood vessel | 100% | 5663.66 | 1332 / 1335 | 0% | 0 | 0 / 0 |
muscle | 98% | 3143.01 | 783 / 803 | 0% | 0 | 0 / 0 |
adipose | 97% | 2794.47 | 1172 / 1204 | 0% | 0 | 0 / 0 |
spleen | 93% | 1784.69 | 224 / 241 | 0% | 0 | 0 / 0 |
heart | 92% | 3807.20 | 790 / 861 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 90% | 9.36 | 26 / 29 |
tonsil | 0% | 0 | 0 / 0 | 89% | 11.45 | 40 / 45 |
eye | 0% | 0 | 0 / 0 | 84% | 12.17 | 67 / 80 |
peripheral blood | 19% | 669.35 | 176 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0042147 | Biological process | retrograde transport, endosome to Golgi |
GO_0043001 | Biological process | Golgi to plasma membrane protein transport |
GO_0006508 | Biological process | proteolysis |
GO_2000300 | Biological process | regulation of synaptic vesicle exocytosis |
GO_0005802 | Cellular component | trans-Golgi network |
GO_0005856 | Cellular component | cytoskeleton |
GO_0005829 | Cellular component | cytosol |
GO_0005794 | Cellular component | Golgi apparatus |
GO_0005634 | Cellular component | nucleus |
GO_0008233 | Molecular function | peptidase activity |
GO_0004252 | Molecular function | serine-type endopeptidase activity |
Gene name | PREPL |
Protein name | Prolyl endopeptidase like Prolyl endopeptidase-like (EC 3.4.21.-) (Prolylendopeptidase-like) |
Synonyms | KIAA0436 |
Description | FUNCTION: Serine peptidase whose precise substrate specificity remains unclear . Does not cleave peptides after a arginine or lysine residue . Regulates trans-Golgi network morphology and sorting by regulating the membrane binding of the AP-1 complex . May play a role in the regulation of synaptic vesicle exocytosis . . |
Accessions | ENST00000409411.6 [Q4J6C6-4] ENST00000426481.5 [Q4J6C6-1] ENST00000378520.7 [Q4J6C6-2] H7BZP6 H7C0M0 ENST00000541738.5 [Q4J6C6-4] ENST00000410081.5 [Q4J6C6-1] ENST00000420756.1 ENST00000409957.5 [Q4J6C6-4] ENST00000378511.7 [Q4J6C6-3] ENST00000444696.5 ENST00000409936.5 [Q4J6C6-1] ENST00000438314.1 Q4J6C6 ENST00000409272.5 [Q4J6C6-1] ENST00000260648.10 [Q4J6C6-1] C9JMT4 ENST00000425263.5 [Q4J6C6-1] |