Insufficient scRNA-seq data for expression of PRDM7 at single-cell level.
Insufficient scRNA-seq data for expression of PRDM7 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
ovary | 91% | 5.97 | 163 / 180 | 0% | 0 | 0 / 430 |
skin | 39% | 0.85 | 711 / 1809 | 49% | 10.84 | 231 / 472 |
kidney | 84% | 5.25 | 75 / 89 | 0% | 0.00 | 2 / 901 |
uterus | 66% | 2.31 | 112 / 170 | 1% | 0.03 | 3 / 459 |
brain | 62% | 1.93 | 1643 / 2642 | 0% | 0.00 | 1 / 705 |
thymus | 61% | 1.74 | 399 / 653 | 0% | 0.00 | 1 / 605 |
prostate | 60% | 1.65 | 148 / 245 | 0% | 0 | 0 / 502 |
liver | 58% | 1.69 | 131 / 226 | 0% | 0.03 | 2 / 406 |
spleen | 57% | 1.96 | 138 / 241 | 0% | 0 | 0 / 0 |
breast | 55% | 1.51 | 252 / 459 | 0% | 0 | 0 / 1118 |
lung | 50% | 1.29 | 289 / 578 | 0% | 0.00 | 3 / 1155 |
adrenal gland | 47% | 1.17 | 120 / 258 | 1% | 0.03 | 3 / 230 |
peripheral blood | 47% | 1.34 | 439 / 929 | 0% | 0 | 0 / 0 |
esophagus | 44% | 0.97 | 632 / 1445 | 1% | 0.01 | 1 / 183 |
adipose | 42% | 1.02 | 502 / 1204 | 0% | 0 | 0 / 0 |
intestine | 38% | 1.10 | 364 / 966 | 0% | 0.00 | 1 / 527 |
stomach | 36% | 0.76 | 129 / 359 | 0% | 0 | 0 / 286 |
pancreas | 33% | 0.64 | 108 / 328 | 0% | 0 | 0 / 178 |
blood vessel | 29% | 0.54 | 385 / 1335 | 0% | 0 | 0 / 0 |
bladder | 24% | 0.38 | 5 / 21 | 0% | 0 | 0 / 504 |
heart | 21% | 0.34 | 181 / 861 | 0% | 0 | 0 / 0 |
muscle | 20% | 0.33 | 157 / 803 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 3% | 0.05 | 2 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 45 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0010845 | Biological process | positive regulation of reciprocal meiotic recombination |
GO_0010468 | Biological process | regulation of gene expression |
GO_0032259 | Biological process | methylation |
GO_0006338 | Biological process | chromatin remodeling |
GO_0006355 | Biological process | regulation of DNA-templated transcription |
GO_0005694 | Cellular component | chromosome |
GO_0005634 | Cellular component | nucleus |
GO_0010844 | Molecular function | recombination hotspot binding |
GO_0042800 | Molecular function | histone H3K4 methyltransferase activity |
GO_0046975 | Molecular function | histone H3K36 methyltransferase activity |
GO_0005515 | Molecular function | protein binding |
Gene name | PRDM7 |
Protein name | PR/SET domain 7 (PRDM7 long isoform, variant 2) PR/SET domain 7 Histone-lysine N-methyltransferase PRDM7 (EC 2.1.1.-) (PR domain zinc finger protein 7) (PR domain-containing protein 7) ([histone H3]-lysine4 N-methyltransferase PRDM7) |
Synonyms | PFM4 PRDM7_V2 |
Description | FUNCTION: Histone methyltransferase that selectively methylates 'Lys-4' of dimethylated histone H3 (H3K4me2) to produce trimethylated 'Lys-4' histone H3 (H3K4me3). May play a role in epigenetic regulation of gene expression by defining an active chromatin state. . |
Accessions | ENST00000568473.5 ENST00000564210.2 A4Q9G9 Q9NQW5 ENST00000449207.8 [Q9NQW5-3] H3BUJ3 |