Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 5 studies | 24% ± 7% | |
fibroblast | 4 studies | 32% ± 13% | |
pancreatic A cell | 3 studies | 37% ± 17% | |
type B pancreatic cell | 3 studies | 37% ± 14% | |
connective tissue cell | 3 studies | 28% ± 10% | |
pericyte | 3 studies | 21% ± 1% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
adrenal gland | 100% | 899.67 | 258 / 258 | 100% | 45.97 | 230 / 230 |
ovary | 100% | 851.02 | 180 / 180 | 100% | 33.48 | 430 / 430 |
brain | 100% | 1189.75 | 2641 / 2642 | 100% | 48.66 | 705 / 705 |
thymus | 100% | 724.76 | 652 / 653 | 100% | 27.14 | 604 / 605 |
breast | 100% | 557.54 | 459 / 459 | 98% | 18.44 | 1097 / 1118 |
skin | 98% | 582.39 | 1767 / 1809 | 99% | 22.38 | 469 / 472 |
uterus | 100% | 1134.41 | 170 / 170 | 95% | 22.16 | 434 / 459 |
bladder | 100% | 817.81 | 21 / 21 | 93% | 16.99 | 469 / 504 |
prostate | 100% | 680.48 | 244 / 245 | 93% | 11.07 | 465 / 502 |
lung | 100% | 723.92 | 576 / 578 | 92% | 12.58 | 1063 / 1155 |
kidney | 100% | 571.31 | 89 / 89 | 81% | 9.94 | 733 / 901 |
stomach | 96% | 430.33 | 345 / 359 | 77% | 8.78 | 220 / 286 |
esophagus | 94% | 567.83 | 1363 / 1445 | 74% | 8.57 | 136 / 183 |
intestine | 97% | 586.35 | 937 / 966 | 68% | 7.65 | 360 / 527 |
pancreas | 40% | 85.37 | 131 / 328 | 96% | 18.49 | 171 / 178 |
liver | 46% | 104.05 | 105 / 226 | 54% | 5.09 | 218 / 406 |
blood vessel | 100% | 1083.14 | 1335 / 1335 | 0% | 0 | 0 / 0 |
spleen | 100% | 541.64 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 54.33 | 1 / 1 |
adipose | 100% | 609.98 | 1202 / 1204 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 97% | 15.59 | 28 / 29 |
heart | 96% | 420.65 | 828 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 95% | 16.45 | 76 / 80 |
peripheral blood | 95% | 502.38 | 881 / 929 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 89% | 10.89 | 40 / 45 |
muscle | 59% | 126.04 | 475 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0015813 | Biological process | L-glutamate transmembrane transport |
GO_0015031 | Biological process | protein transport |
GO_0010008 | Cellular component | endosome membrane |
GO_0016020 | Cellular component | membrane |
GO_0005515 | Molecular function | protein binding |
Gene name | PRAF2 |
Protein name | PRA1 family protein PRA1 family protein 2 |
Synonyms | JM4 |
Description | FUNCTION: May be involved in ER/Golgi transport and vesicular traffic. Plays a proapoptotic role in cerulenin-induced neuroblastoma apoptosis. . |
Accessions | ENST00000376386.3 O60831 A6NP52 ENST00000710261.1 ENST00000553851.3 |