Name | Number of supported studies | Average coverage | |
---|---|---|---|
glutamatergic neuron | 4 studies | 32% ± 15% | |
oligodendrocyte precursor cell | 4 studies | 25% ± 5% | |
GABAergic neuron | 3 studies | 34% ± 11% | |
astrocyte | 3 studies | 18% ± 3% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 4 studies | 25% ± 12% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
prostate | 100% | 3921.59 | 245 / 245 | 100% | 20.91 | 502 / 502 |
brain | 100% | 4047.51 | 2640 / 2642 | 100% | 28.40 | 705 / 705 |
breast | 100% | 2446.45 | 459 / 459 | 99% | 13.74 | 1112 / 1118 |
pancreas | 100% | 1828.97 | 328 / 328 | 99% | 10.51 | 177 / 178 |
uterus | 100% | 3179.68 | 170 / 170 | 99% | 11.37 | 456 / 459 |
thymus | 100% | 2901.56 | 653 / 653 | 99% | 13.22 | 601 / 605 |
kidney | 100% | 2708.71 | 89 / 89 | 99% | 12.86 | 895 / 901 |
skin | 100% | 2227.93 | 1809 / 1809 | 99% | 12.23 | 468 / 472 |
liver | 100% | 1480.88 | 225 / 226 | 100% | 9.88 | 404 / 406 |
lung | 100% | 2313.48 | 578 / 578 | 99% | 10.28 | 1142 / 1155 |
intestine | 100% | 3012.22 | 966 / 966 | 99% | 10.51 | 520 / 527 |
stomach | 100% | 2080.52 | 359 / 359 | 98% | 9.52 | 281 / 286 |
ovary | 100% | 3472.95 | 180 / 180 | 98% | 9.07 | 422 / 430 |
bladder | 100% | 2185.81 | 21 / 21 | 98% | 10.11 | 494 / 504 |
esophagus | 100% | 2752.94 | 1444 / 1445 | 97% | 8.03 | 178 / 183 |
adrenal gland | 100% | 2602.95 | 258 / 258 | 96% | 12.03 | 221 / 230 |
spleen | 100% | 2994.89 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 8.41 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 10.39 | 1 / 1 |
adipose | 100% | 2055.82 | 1203 / 1204 | 0% | 0 | 0 / 0 |
muscle | 100% | 2559.94 | 802 / 803 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 2270.84 | 1333 / 1335 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 99% | 13.82 | 79 / 80 |
heart | 98% | 1743.15 | 843 / 861 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 97% | 8.66 | 28 / 29 |
peripheral blood | 76% | 953.78 | 702 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0030198 | Biological process | extracellular matrix organization |
GO_1904100 | Biological process | positive regulation of protein O-linked glycosylation |
GO_0006493 | Biological process | protein O-linked glycosylation |
GO_0035269 | Biological process | protein O-linked mannosylation |
GO_0005783 | Cellular component | endoplasmic reticulum |
GO_0001669 | Cellular component | acrosomal vesicle |
GO_0016529 | Cellular component | sarcoplasmic reticulum |
GO_0016020 | Cellular component | membrane |
GO_0005789 | Cellular component | endoplasmic reticulum membrane |
GO_0004169 | Molecular function | dolichyl-phosphate-mannose-protein mannosyltransferase activity |
GO_0046872 | Molecular function | metal ion binding |
GO_0000030 | Molecular function | mannosyltransferase activity |
Gene name | POMT1 |
Protein name | Protein O-mannosyl-transferase 1 (EC 2.4.1.109) (Dolichyl-phosphate-mannose--protein mannosyltransferase 1) Protein O-mannosyltransferase 1 Protein O-mannosyltransferase 1 (Truncated O-mannosyl-transferase 1 variant SV3DEL (EC 2.4.1.109)) Dolichyl-phosphate-mannose--protein mannosyltransferase (EC 2.4.1.109) dolichyl-phosphate-mannose--protein mannosyltransferase (EC 2.4.1.109) |
Synonyms | hCG_29235 |
Description | FUNCTION: Transfers mannosyl residues to the hydroxyl group of serine or threonine residues. Coexpression of both POMT1 and POMT2 is necessary for enzyme activity, expression of either POMT1 or POMT2 alone is insufficient . Essentially dedicated to O-mannosylation of alpha-DAG1 and few other proteins but not of cadherins and protocaherins . . FUNCTION: Transfers mannose from Dol-P-mannose to Ser or Thr residues on proteins. . FUNCTION: Transfers mannose from Dol-P-mannose to Ser or Thr residues on proteins. . FUNCTION: Transfers mannose from Dol-P-mannose to Ser or Thr residues on proteins. . FUNCTION: Transfers mannose from Dol-P-mannose to Ser or Thr residues on proteins. . FUNCTION: Transfers mannose from Dol-P-mannose to Ser or Thr residues on proteins. . FUNCTION: Transfers mannose from Dol-P-mannose to Ser or Thr residues on proteins. . |
Accessions | ENST00000682639.1 A0A7I2YQK3 A0A7I2V5P7 A0A7I2V4L4 A0A804HKU5 Q5JT02 ENST00000677029.1 Q5JT07 A0A7I2V4U3 A0A7I2V3H8 ENST00000678833.1 ENST00000677099.1 A0A7I2V2T7 ENST00000678303.1 ENST00000448212.5 Q5JT05 ENST00000678739.1 A0A7I2V505 ENST00000677167.1 ENST00000678264.2 ENST00000677944.1 A0A804HI97 ENST00000679076.1 A0A7I2V3L5 ENST00000676803.1 ENST00000677729.1 ENST00000372220.5 ENST00000679023.1 [Q9Y6A1-3] ENST00000415075.6 ENST00000679111.1 ENST00000677293.1 A0A804HHZ8 ENST00000683229.1 ENST00000677853.1 Q5JT03 Q9Y6A1 A0A7I2V356 A0A7I2V524 ENST00000678548.1 A0A7I2V5S7 A0A7I2V5V4 ENST00000430619.2 A0A7I2V2K0 ENST00000418774.6 ENST00000683231.1 ENST00000341012.13 [Q9Y6A1-3] ENST00000678366.1 A0A7I2V2G9 ENST00000677028.1 A0A804HKS2 ENST00000678942.2 ENST00000677295.2 ENST00000683615.1 ENST00000677216.1 [Q9Y6A1-4] A0A7I2V568 ENST00000679221.1 A0A7I2V5W1 ENST00000676835.1 B4DTW4 ENST00000678733.1 Q5JT04 A0A7I2V445 ENST00000676915.1 ENST00000441334.5 ENST00000678785.1 ENST00000684399.1 ENST00000679189.1 [Q9Y6A1-4] A0A7I2V5X3 ENST00000423007.6 ENST00000677626.1 ENST00000683134.1 A0A7I2V4U0 B4DWD8 ENST00000402686.8 [Q9Y6A1-2] Q5JSZ6 ENST00000676640.1 [Q9Y6A1-2] A0A804HIE5 ENST00000682539.1 ENST00000372228.9 [Q9Y6A1-1] A0A1V1FTP4 |